Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 KRT16P2-201ENST00000414673 1423 ntBASIC19.07■□□□□ 0.64
SPENQ96T58 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPENQ96T58 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.06■□□□□ 0.64
SPENQ96T58 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SPENQ96T58 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SPENQ96T58 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPENQ96T58 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.06■□□□□ 0.64
SPENQ96T58 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.06■□□□□ 0.64
SPENQ96T58 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.06■□□□□ 0.64
SPENQ96T58 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPENQ96T58 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPENQ96T58 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPENQ96T58 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
SPENQ96T58 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SPENQ96T58 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.06■□□□□ 0.64
SPENQ96T58 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.05■□□□□ 0.64
SPENQ96T58 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPENQ96T58 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPENQ96T58 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPENQ96T58 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.05■□□□□ 0.64
SPENQ96T58 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPENQ96T58 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.05■□□□□ 0.64
SPENQ96T58 MIR1224-201ENST00000408193 85 ntBASIC19.05■□□□□ 0.64
SPENQ96T58 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.05■□□□□ 0.64
SPENQ96T58 UBE2SP1-201ENST00000450587 669 ntBASIC19.05■□□□□ 0.64
SPENQ96T58 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.05■□□□□ 0.64
SPENQ96T58 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.05■□□□□ 0.64
SPENQ96T58 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SPENQ96T58 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPENQ96T58 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SPENQ96T58 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPENQ96T58 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.05■□□□□ 0.64
SPENQ96T58 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 OR7E47P-201ENST00000546390 1422 ntBASIC19.04■□□□□ 0.64
SPENQ96T58 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.04■□□□□ 0.64
SPENQ96T58 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 AC010542.4-201ENST00000563151 1910 ntBASIC19.04■□□□□ 0.64
SPENQ96T58 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.04■□□□□ 0.64
SPENQ96T58 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SPENQ96T58 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.04■□□□□ 0.64
SPENQ96T58 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.04■□□□□ 0.64
SPENQ96T58 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.04■□□□□ 0.64
SPENQ96T58 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SPENQ96T58 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.04■□□□□ 0.64
SPENQ96T58 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.04■□□□□ 0.64
SPENQ96T58 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.04■□□□□ 0.64
SPENQ96T58 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.04■□□□□ 0.64
SPENQ96T58 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPENQ96T58 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPENQ96T58 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SPENQ96T58 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPENQ96T58 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPENQ96T58 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.03■□□□□ 0.64
SPENQ96T58 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPENQ96T58 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPENQ96T58 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.03■□□□□ 0.64
SPENQ96T58 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPENQ96T58 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SPENQ96T58 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPENQ96T58 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPENQ96T58 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.03■□□□□ 0.64
SPENQ96T58 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.03■□□□□ 0.64
SPENQ96T58 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SPENQ96T58 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPENQ96T58 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPENQ96T58 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPENQ96T58 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPENQ96T58 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.02■□□□□ 0.64
SPENQ96T58 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPENQ96T58 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPENQ96T58 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.02■□□□□ 0.64
SPENQ96T58 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.02■□□□□ 0.64
SPENQ96T58 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPENQ96T58 AC053503.5-201ENST00000601508 636 ntBASIC19.02■□□□□ 0.64
SPENQ96T58 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPENQ96T58 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.02■□□□□ 0.63
SPENQ96T58 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPENQ96T58 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
SPENQ96T58 AL445228.2-201ENST00000605589 952 ntBASIC19.02■□□□□ 0.63
SPENQ96T58 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
SPENQ96T58 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.01■□□□□ 0.63
SPENQ96T58 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.01■□□□□ 0.63
SPENQ96T58 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SPENQ96T58 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPENQ96T58 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.01■□□□□ 0.63
SPENQ96T58 AC069544.1-201ENST00000609399 999 ntBASIC19.01■□□□□ 0.63
SPENQ96T58 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPENQ96T58 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPENQ96T58 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPENQ96T58 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPENQ96T58 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.01■□□□□ 0.63
SPENQ96T58 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.01■□□□□ 0.63
SPENQ96T58 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms