Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RAB40CQ96S21 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40CQ96S21 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
RAB40CQ96S21 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40CQ96S21 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB40CQ96S21 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RAB40CQ96S21 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RAB40CQ96S21 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RAB40CQ96S21 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40CQ96S21 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40CQ96S21 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB40CQ96S21 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB40CQ96S21 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40CQ96S21 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40CQ96S21 AL117332.1-201ENST00000622628 974 ntBASIC16.96■□□□□ 0.31
RAB40CQ96S21 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RAB40CQ96S21 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40CQ96S21 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB40CQ96S21 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RAB40CQ96S21 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
RAB40CQ96S21 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.96■□□□□ 0.3
RAB40CQ96S21 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RAB40CQ96S21 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40CQ96S21 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAB40CQ96S21 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40CQ96S21 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
RAB40CQ96S21 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RAB40CQ96S21 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40CQ96S21 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB40CQ96S21 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB40CQ96S21 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40CQ96S21 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40CQ96S21 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40CQ96S21 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40CQ96S21 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40CQ96S21 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40CQ96S21 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40CQ96S21 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40CQ96S21 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RAB40CQ96S21 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40CQ96S21 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RAB40CQ96S21 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.94■□□□□ 0.3
RAB40CQ96S21 AL035685.1-201ENST00000636663 812 ntBASIC16.94■□□□□ 0.3
RAB40CQ96S21 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 PLK5-205ENST00000642079 1969 ntBASIC16.94■□□□□ 0.3
RAB40CQ96S21 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RAB40CQ96S21 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40CQ96S21 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB40CQ96S21 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB40CQ96S21 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB40CQ96S21 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB40CQ96S21 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.93■□□□□ 0.3
RAB40CQ96S21 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 pRNA.6-201ENST00000610482 90 ntBASIC16.93■□□□□ 0.3
RAB40CQ96S21 pRNA.5-201ENST00000612139 90 ntBASIC16.93■□□□□ 0.3
RAB40CQ96S21 pRNA.11-201ENST00000618423 90 ntBASIC16.93■□□□□ 0.3
RAB40CQ96S21 pRNA.13-201ENST00000619112 90 ntBASIC16.93■□□□□ 0.3
RAB40CQ96S21 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RAB40CQ96S21 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RAB40CQ96S21 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RAB40CQ96S21 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40CQ96S21 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40CQ96S21 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40CQ96S21 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40CQ96S21 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40CQ96S21 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40CQ96S21 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40CQ96S21 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 AC010997.5-201ENST00000609182 354 ntBASIC16.92■□□□□ 0.3
RAB40CQ96S21 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms