Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
DUX3Q96PT4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 AC010542.4-201ENST00000563151 1910 ntBASIC16.28■□□□□ 0.2
DUX3Q96PT4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.28■□□□□ 0.2
DUX3Q96PT4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX3Q96PT4 NCF1B-203ENST00000435988 1254 ntBASIC16.28■□□□□ 0.2
DUX3Q96PT4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.28■□□□□ 0.2
DUX3Q96PT4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.28■□□□□ 0.2
DUX3Q96PT4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX3Q96PT4 AC010536.3-201ENST00000620306 533 ntBASIC16.28■□□□□ 0.2
DUX3Q96PT4 AC231657.2-201ENST00000624556 255 ntBASIC16.28■□□□□ 0.2
DUX3Q96PT4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.28■□□□□ 0.2
DUX3Q96PT4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX3Q96PT4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX3Q96PT4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX3Q96PT4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX3Q96PT4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX3Q96PT4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX3Q96PT4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX3Q96PT4 GPX1P1-201ENST00000388829 606 ntBASIC16.27■□□□□ 0.2
DUX3Q96PT4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.27■□□□□ 0.2
DUX3Q96PT4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX3Q96PT4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DUX3Q96PT4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.27■□□□□ 0.19
DUX3Q96PT4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
DUX3Q96PT4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DUX3Q96PT4 AC233723.2-201ENST00000623798 2106 ntBASIC16.27■□□□□ 0.19
DUX3Q96PT4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DUX3Q96PT4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 FAM99A-202ENST00000538190 1989 ntBASIC16.26■□□□□ 0.19
DUX3Q96PT4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
DUX3Q96PT4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DUX3Q96PT4 AC061975.6-201ENST00000579045 1553 ntBASIC16.26■□□□□ 0.19
DUX3Q96PT4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DUX3Q96PT4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DUX3Q96PT4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
DUX3Q96PT4 CLDN5-201ENST00000403084 2357 ntBASIC16.25■□□□□ 0.19
DUX3Q96PT4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.25■□□□□ 0.19
DUX3Q96PT4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
DUX3Q96PT4 CNN2P6-201ENST00000439038 900 ntBASIC16.25■□□□□ 0.19
DUX3Q96PT4 AC083906.2-201ENST00000511578 360 ntBASIC16.25■□□□□ 0.19
DUX3Q96PT4 KRT18P20-201ENST00000548986 1279 ntBASIC16.25■□□□□ 0.19
DUX3Q96PT4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.25■□□□□ 0.19
DUX3Q96PT4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.25■□□□□ 0.19
DUX3Q96PT4 AC008175.2-201ENST00000612840 297 ntBASIC16.25■□□□□ 0.19
DUX3Q96PT4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
DUX3Q96PT4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
DUX3Q96PT4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DUX3Q96PT4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.25■□□□□ 0.19
DUX3Q96PT4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.24■□□□□ 0.19
DUX3Q96PT4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.24■□□□□ 0.19
DUX3Q96PT4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.24■□□□□ 0.19
DUX3Q96PT4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
DUX3Q96PT4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.24■□□□□ 0.19
DUX3Q96PT4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.24■□□□□ 0.19
DUX3Q96PT4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.24■□□□□ 0.19
DUX3Q96PT4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
DUX3Q96PT4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DUX3Q96PT4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms