Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDLIM5Q96HC4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 ZNRF2P3-201ENST00000424200 374 ntBASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDLIM5Q96HC4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDLIM5Q96HC4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.46■□□□□ 0.87
PDLIM5Q96HC4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 AC010141.2-201ENST00000452426 721 ntBASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 AC006128.1-201ENST00000624704 1661 ntBASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 PLK5-205ENST00000642079 1969 ntBASIC20.45■□□□□ 0.86
PDLIM5Q96HC4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 KRT16P2-201ENST00000414673 1423 ntBASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 AC121338.2-201ENST00000622535 1744 ntBASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 CCDC92B-201ENST00000575506 885 ntBASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM5Q96HC4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms