Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 AC011767.1-201ENST00000617410 1153 ntBASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 AC073111.5-205ENST00000641717 521 ntBASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 FAM99A-202ENST00000538190 1989 ntBASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.72■□□□□ 0.91
SH3KBP1Q96B97 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 AC026185.1-201ENST00000445748 174 ntBASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 KRT18P20-201ENST00000548986 1279 ntBASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 AC138907.5-202ENST00000569484 235 ntBASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3KBP1Q96B97 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 CDCA4P2-201ENST00000441182 718 ntBASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 FBXW4P1-201ENST00000426721 2239 ntBASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 AC007375.3-201ENST00000600936 2314 ntBASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SH3KBP1Q96B97 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 AC010141.2-201ENST00000452426 721 ntBASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 AC053503.5-201ENST00000601508 636 ntBASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.69■□□□□ 0.9
SH3KBP1Q96B97 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3KBP1Q96B97 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.68■□□□□ 0.9
SH3KBP1Q96B97 ID1-201ENST00000376105 1233 ntBASIC20.68■□□□□ 0.9
SH3KBP1Q96B97 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3KBP1Q96B97 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.68■□□□□ 0.9
SH3KBP1Q96B97 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.68■□□□□ 0.9
SH3KBP1Q96B97 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3KBP1Q96B97 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3KBP1Q96B97 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3KBP1Q96B97 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 EEF1DP3-203ENST00000566025 782 ntBASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.67■□□□□ 0.9
SH3KBP1Q96B97 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 RAP2CP1-201ENST00000605103 478 ntBASIC20.66■□□□□ 0.9
SH3KBP1Q96B97 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms