Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NPIPB3Q92617 AL136116.3-201ENST00000402907 1138 ntBASIC16.5■□□□□ 0.23
NPIPB3Q92617 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 BX842568.3-201ENST00000418104 571 ntBASIC16.5■□□□□ 0.23
NPIPB3Q92617 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.5■□□□□ 0.23
NPIPB3Q92617 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.5■□□□□ 0.23
NPIPB3Q92617 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPIPB3Q92617 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPIPB3Q92617 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.49■□□□□ 0.23
NPIPB3Q92617 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.48■□□□□ 0.23
NPIPB3Q92617 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 FEM1AP1-201ENST00000431297 1995 ntBASIC16.48■□□□□ 0.23
NPIPB3Q92617 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.48■□□□□ 0.23
NPIPB3Q92617 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 MIR4767-201ENST00000582827 78 ntBASIC16.48■□□□□ 0.23
NPIPB3Q92617 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB3Q92617 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.48■□□□□ 0.23
NPIPB3Q92617 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.47■□□□□ 0.23
NPIPB3Q92617 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 UNC93B3-201ENST00000308076 687 ntBASIC16.47■□□□□ 0.23
NPIPB3Q92617 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 AC126544.1-201ENST00000580842 1059 ntBASIC16.47■□□□□ 0.23
NPIPB3Q92617 AC233992.3-201ENST00000607491 485 ntBASIC16.47■□□□□ 0.23
NPIPB3Q92617 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB3Q92617 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPB3Q92617 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.46■□□□□ 0.23
NPIPB3Q92617 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPB3Q92617 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPB3Q92617 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NPIPB3Q92617 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NPIPB3Q92617 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB3Q92617 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NPIPB3Q92617 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.46■□□□□ 0.23
NPIPB3Q92617 AC133561.4-201ENST00000566112 224 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms