Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TM9SF4Q92544 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM9SF4Q92544 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
TM9SF4Q92544 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TM9SF4Q92544 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.74■□□□□ 0.75
TM9SF4Q92544 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.74■□□□□ 0.75
TM9SF4Q92544 KRT18P20-201ENST00000548986 1279 ntBASIC19.74■□□□□ 0.75
TM9SF4Q92544 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.74■□□□□ 0.75
TM9SF4Q92544 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM9SF4Q92544 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TM9SF4Q92544 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM9SF4Q92544 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM9SF4Q92544 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM9SF4Q92544 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.73■□□□□ 0.75
TM9SF4Q92544 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TM9SF4Q92544 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM9SF4Q92544 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TM9SF4Q92544 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.73■□□□□ 0.75
TM9SF4Q92544 AC083906.2-201ENST00000511578 360 ntBASIC19.73■□□□□ 0.75
TM9SF4Q92544 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.73■□□□□ 0.75
TM9SF4Q92544 DUX4L16-201ENST00000555130 1264 ntBASIC19.73■□□□□ 0.75
TM9SF4Q92544 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM9SF4Q92544 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.73■□□□□ 0.75
TM9SF4Q92544 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.73■□□□□ 0.75
TM9SF4Q92544 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM9SF4Q92544 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TM9SF4Q92544 LINC01960-201ENST00000563759 1884 ntBASIC19.73■□□□□ 0.75
TM9SF4Q92544 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM9SF4Q92544 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM9SF4Q92544 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM9SF4Q92544 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM9SF4Q92544 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.72■□□□□ 0.75
TM9SF4Q92544 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM9SF4Q92544 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM9SF4Q92544 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM9SF4Q92544 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.72■□□□□ 0.75
TM9SF4Q92544 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TM9SF4Q92544 CD99P1-205ENST00000527459 561 ntBASIC19.72■□□□□ 0.75
TM9SF4Q92544 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.72■□□□□ 0.75
TM9SF4Q92544 AC142086.2-201ENST00000569753 217 ntBASIC19.72■□□□□ 0.75
TM9SF4Q92544 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.72■□□□□ 0.75
TM9SF4Q92544 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.72■□□□□ 0.75
TM9SF4Q92544 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TM9SF4Q92544 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM9SF4Q92544 PKD1P6-201ENST00000343738 4769 ntBASIC19.72■□□□□ 0.75
TM9SF4Q92544 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM9SF4Q92544 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM9SF4Q92544 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TM9SF4Q92544 AC055733.4-201ENST00000638462 1354 ntBASIC19.71■□□□□ 0.75
TM9SF4Q92544 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM9SF4Q92544 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
TM9SF4Q92544 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TM9SF4Q92544 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TM9SF4Q92544 TSPY6P-201ENST00000448518 926 ntBASIC19.71■□□□□ 0.75
TM9SF4Q92544 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.71■□□□□ 0.75
TM9SF4Q92544 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM9SF4Q92544 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.71■□□□□ 0.75
TM9SF4Q92544 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TM9SF4Q92544 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TM9SF4Q92544 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM9SF4Q92544 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM9SF4Q92544 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM9SF4Q92544 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM9SF4Q92544 ABHD17AP1-201ENST00000358206 933 ntBASIC19.7■□□□□ 0.74
TM9SF4Q92544 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM9SF4Q92544 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM9SF4Q92544 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.7■□□□□ 0.74
TM9SF4Q92544 AC010141.2-201ENST00000452426 721 ntBASIC19.7■□□□□ 0.74
TM9SF4Q92544 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.7■□□□□ 0.74
TM9SF4Q92544 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TM9SF4Q92544 AP004607.7-201ENST00000527152 1677 ntBASIC19.7■□□□□ 0.74
TM9SF4Q92544 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM9SF4Q92544 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM9SF4Q92544 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM9SF4Q92544 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM9SF4Q92544 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TM9SF4Q92544 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TM9SF4Q92544 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.69■□□□□ 0.74
TM9SF4Q92544 OR7E47P-201ENST00000546390 1422 ntBASIC19.69■□□□□ 0.74
TM9SF4Q92544 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM9SF4Q92544 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM9SF4Q92544 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM9SF4Q92544 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.69■□□□□ 0.74
TM9SF4Q92544 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM9SF4Q92544 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM9SF4Q92544 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.69■□□□□ 0.74
TM9SF4Q92544 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM9SF4Q92544 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.69■□□□□ 0.74
TM9SF4Q92544 AC138907.5-202ENST00000569484 235 ntBASIC19.69■□□□□ 0.74
TM9SF4Q92544 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.69■□□□□ 0.74
TM9SF4Q92544 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM9SF4Q92544 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF4Q92544 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF4Q92544 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF4Q92544 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF4Q92544 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM9SF4Q92544 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.68■□□□□ 0.74
TM9SF4Q92544 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms