Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SKA2Q8WVK7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKA2Q8WVK7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 TERF1P2-201ENST00000583350 1212 ntBASIC20.71■□□□□ 0.91
SKA2Q8WVK7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SKA2Q8WVK7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SKA2Q8WVK7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.7■□□□□ 0.9
SKA2Q8WVK7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 CLDN5-201ENST00000403084 2357 ntBASIC20.69■□□□□ 0.9
SKA2Q8WVK7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKA2Q8WVK7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 AC026310.3-201ENST00000625186 2373 ntBASIC20.68■□□□□ 0.9
SKA2Q8WVK7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 AC097381.1-201ENST00000429019 1296 ntBASIC20.68■□□□□ 0.9
SKA2Q8WVK7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKA2Q8WVK7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SKA2Q8WVK7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SKA2Q8WVK7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SKA2Q8WVK7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms