Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM3Q8TF72 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHROOM3Q8TF72 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.44■■□□□ 1.02
SHROOM3Q8TF72 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM3Q8TF72 AC008175.2-201ENST00000612840 297 ntBASIC21.43■■□□□ 1.02
SHROOM3Q8TF72 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM3Q8TF72 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
SHROOM3Q8TF72 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM3Q8TF72 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
SHROOM3Q8TF72 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM3Q8TF72 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SHROOM3Q8TF72 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHROOM3Q8TF72 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 AC053503.5-201ENST00000601508 636 ntBASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SHROOM3Q8TF72 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 KRT18P20-201ENST00000548986 1279 ntBASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 KRT16P2-201ENST00000414673 1423 ntBASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHROOM3Q8TF72 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHROOM3Q8TF72 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHROOM3Q8TF72 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHROOM3Q8TF72 POU5F1P4-201ENST00000413175 1085 ntBASIC21.39■■□□□ 1.02
SHROOM3Q8TF72 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHROOM3Q8TF72 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.39■■□□□ 1.02
SHROOM3Q8TF72 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.02
SHROOM3Q8TF72 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 AC137761.2-201ENST00000561729 223 ntBASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 AC145350.3-201ENST00000569033 163 ntBASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHROOM3Q8TF72 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 SLC7A5P2-201ENST00000553010 536 ntBASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.38■■□□□ 1.01
SHROOM3Q8TF72 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHROOM3Q8TF72 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHROOM3Q8TF72 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.37■■□□□ 1.01
SHROOM3Q8TF72 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.37■■□□□ 1.01
SHROOM3Q8TF72 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHROOM3Q8TF72 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SHROOM3Q8TF72 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms