Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.82■■□□□ 1.88
LINC00116Q8NCU8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LINC00116Q8NCU8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LINC00116Q8NCU8 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.82■■□□□ 1.88
LINC00116Q8NCU8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LINC00116Q8NCU8 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.82■■□□□ 1.88
LINC00116Q8NCU8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.82■■□□□ 1.88
LINC00116Q8NCU8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
LINC00116Q8NCU8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 SNORA78-201ENST00000459373 127 ntBASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 AL589743.5-201ENST00000616611 1050 ntBASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.81■■□□□ 1.88
LINC00116Q8NCU8 AC092368.3-202ENST00000574180 1591 ntBASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
LINC00116Q8NCU8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 MCRIP2P1-201ENST00000394346 511 ntBASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
LINC00116Q8NCU8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 AC211429.1-201ENST00000415277 523 ntBASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 KRT17P3-201ENST00000420566 1262 ntBASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 CDV3P1-201ENST00000471403 739 ntBASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
LINC00116Q8NCU8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 SOX15-203ENST00000570788 1093 ntBASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 AC069544.1-201ENST00000609399 999 ntBASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
LINC00116Q8NCU8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
LINC00116Q8NCU8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LINC00116Q8NCU8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
LINC00116Q8NCU8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
LINC00116Q8NCU8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LINC00116Q8NCU8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.76■■□□□ 1.87
LINC00116Q8NCU8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LINC00116Q8NCU8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LINC00116Q8NCU8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
LINC00116Q8NCU8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.75■■□□□ 1.87
LINC00116Q8NCU8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
LINC00116Q8NCU8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LINC00116Q8NCU8 AC245052.3-201ENST00000450182 901 ntBASIC26.75■■□□□ 1.87
LINC00116Q8NCU8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.75■■□□□ 1.87
LINC00116Q8NCU8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
LINC00116Q8NCU8 AC093323.1-202ENST00000635031 2045 ntBASIC26.75■■□□□ 1.87
LINC00116Q8NCU8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.74■■□□□ 1.87
LINC00116Q8NCU8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.74■■□□□ 1.87
LINC00116Q8NCU8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms