Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAM1L1Q8N609 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAM1L1Q8N609 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAM1L1Q8N609 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 AC080038.1-201ENST00000611274 1154 ntBASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 AC010536.3-201ENST00000620306 533 ntBASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAM1L1Q8N609 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAM1L1Q8N609 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRAM1L1Q8N609 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAM1L1Q8N609 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 AC245052.3-201ENST00000450182 901 ntBASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 TERF1P5-201ENST00000477545 1207 ntBASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 DUX4L16-201ENST00000555130 1264 ntBASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 AC243732.1-201ENST00000612648 864 ntBASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 RBM17P2-201ENST00000616397 1405 ntBASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms