Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
ARHGEF28Q8N1W1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 RPS2P52-201ENST00000469610 820 ntBASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 CYP2T3P-201ENST00000601990 817 ntBASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC29.32■■■□□ 2.28
ARHGEF28Q8N1W1 PRORSD1P-201ENST00000295112 541 ntBASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 FAM201B-201ENST00000458407 597 ntBASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 AC007322.3-201ENST00000426526 701 ntBASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
ARHGEF28Q8N1W1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC29.3■■■□□ 2.28
ARHGEF28Q8N1W1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC29.29■■■□□ 2.28
ARHGEF28Q8N1W1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ARHGEF28Q8N1W1 AC093827.2-201ENST00000512654 315 ntBASIC29.29■■■□□ 2.28
ARHGEF28Q8N1W1 UNC93B5-201ENST00000530315 699 ntBASIC29.29■■■□□ 2.28
ARHGEF28Q8N1W1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ARHGEF28Q8N1W1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ARHGEF28Q8N1W1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ARHGEF28Q8N1W1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC29.29■■■□□ 2.28
ARHGEF28Q8N1W1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ARHGEF28Q8N1W1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 OR2A1-AS1-201ENST00000462305 773 ntBASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 AC097658.1-201ENST00000475555 843 ntBASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
ARHGEF28Q8N1W1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ARHGEF28Q8N1W1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ARHGEF28Q8N1W1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ARHGEF28Q8N1W1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ARHGEF28Q8N1W1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ARHGEF28Q8N1W1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC29.27■■■□□ 2.28
ARHGEF28Q8N1W1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ARHGEF28Q8N1W1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ARHGEF28Q8N1W1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ARHGEF28Q8N1W1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
ARHGEF28Q8N1W1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC29.26■■■□□ 2.27
ARHGEF28Q8N1W1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ARHGEF28Q8N1W1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ARHGEF28Q8N1W1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC29.26■■■□□ 2.27
ARHGEF28Q8N1W1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ARHGEF28Q8N1W1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ARHGEF28Q8N1W1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC29.26■■■□□ 2.27
ARHGEF28Q8N1W1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms