Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
UBR1Q8IWV7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC30.25■■■□□ 2.43
UBR1Q8IWV7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC30.25■■■□□ 2.43
UBR1Q8IWV7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC30.25■■■□□ 2.43
UBR1Q8IWV7 AL589743.5-201ENST00000616611 1050 ntBASIC30.25■■■□□ 2.43
UBR1Q8IWV7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
UBR1Q8IWV7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 OR2A1-AS1-207ENST00000486094 819 ntBASIC30.23■■■□□ 2.43
UBR1Q8IWV7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 AC087742.1-201ENST00000575880 1738 ntBASIC30.23■■■□□ 2.43
UBR1Q8IWV7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.23■■■□□ 2.43
UBR1Q8IWV7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 AC233702.5-201ENST00000584107 538 ntBASIC30.22■■■□□ 2.43
UBR1Q8IWV7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC30.22■■■□□ 2.43
UBR1Q8IWV7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 TSPY7P-201ENST00000431358 1114 ntBASIC30.21■■■□□ 2.43
UBR1Q8IWV7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 KRT18P21-201ENST00000515767 1272 ntBASIC30.21■■■□□ 2.43
UBR1Q8IWV7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
UBR1Q8IWV7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.2■■■□□ 2.43
UBR1Q8IWV7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
UBR1Q8IWV7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
UBR1Q8IWV7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC30.2■■■□□ 2.43
UBR1Q8IWV7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC30.2■■■□□ 2.43
UBR1Q8IWV7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
UBR1Q8IWV7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
UBR1Q8IWV7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
UBR1Q8IWV7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
UBR1Q8IWV7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC30.2■■■□□ 2.42
UBR1Q8IWV7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC30.2■■■□□ 2.42
UBR1Q8IWV7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC30.2■■■□□ 2.42
UBR1Q8IWV7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC30.19■■■□□ 2.42
UBR1Q8IWV7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
UBR1Q8IWV7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
UBR1Q8IWV7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
UBR1Q8IWV7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
UBR1Q8IWV7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC30.19■■■□□ 2.42
UBR1Q8IWV7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
UBR1Q8IWV7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
UBR1Q8IWV7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC30.18■■■□□ 2.42
UBR1Q8IWV7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
UBR1Q8IWV7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
UBR1Q8IWV7 RPS2P55-201ENST00000397318 883 ntBASIC30.18■■■□□ 2.42
UBR1Q8IWV7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
UBR1Q8IWV7 CDV3P1-201ENST00000471403 739 ntBASIC30.18■■■□□ 2.42
UBR1Q8IWV7 AC107956.1-201ENST00000494359 873 ntBASIC30.18■■■□□ 2.42
UBR1Q8IWV7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC30.18■■■□□ 2.42
UBR1Q8IWV7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC30.18■■■□□ 2.42
UBR1Q8IWV7 AC105020.6-201ENST00000621523 1217 ntBASIC30.18■■■□□ 2.42
UBR1Q8IWV7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
UBR1Q8IWV7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
UBR1Q8IWV7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
UBR1Q8IWV7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
UBR1Q8IWV7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
UBR1Q8IWV7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
UBR1Q8IWV7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
UBR1Q8IWV7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 REXO1L12P-201ENST00000622156 912 ntBASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms