Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 FP325331.1-202ENST00000623531 1380 ntBASIC18.42■□□□□ 0.54
LYSMD2Q8IV50 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD2Q8IV50 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 AC139795.1-202ENST00000500444 432 ntBASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 AC020907.5-201ENST00000624372 1936 ntBASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.4■□□□□ 0.54
LYSMD2Q8IV50 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD2Q8IV50 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD2Q8IV50 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 AL162377.1-201ENST00000618844 1793 ntBASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD2Q8IV50 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LYSMD2Q8IV50 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms