Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 TERF1P5-201ENST00000477545 1207 ntBASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRTM4Q86VH4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 AC007322.1-201ENST00000426983 750 ntBASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 AC244015.2-201ENST00000616358 1861 ntBASIC20.6■□□□□ 0.89
LRRTM4Q86VH4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 AC013268.1-206ENST00000638368 961 ntBASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 AC112229.1-201ENST00000639295 961 ntBASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRTM4Q86VH4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRTM4Q86VH4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.58■□□□□ 0.88
LRRTM4Q86VH4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRTM4Q86VH4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.58■□□□□ 0.88
LRRTM4Q86VH4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRTM4Q86VH4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRTM4Q86VH4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRTM4Q86VH4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LRRTM4Q86VH4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 RBM17P2-201ENST00000616397 1405 ntBASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRRTM4Q86VH4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms