Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LDB1Q86U70 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LDB1Q86U70 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.91■□□□□ 0.94
LDB1Q86U70 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.91■□□□□ 0.94
LDB1Q86U70 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.91■□□□□ 0.94
LDB1Q86U70 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.91■□□□□ 0.94
LDB1Q86U70 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LDB1Q86U70 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LDB1Q86U70 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDB1Q86U70 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LDB1Q86U70 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.9■□□□□ 0.94
LDB1Q86U70 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDB1Q86U70 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDB1Q86U70 YBX1P1-201ENST00000445822 960 ntBASIC20.9■□□□□ 0.94
LDB1Q86U70 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.9■□□□□ 0.94
LDB1Q86U70 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LDB1Q86U70 AC053503.5-201ENST00000601508 636 ntBASIC20.9■□□□□ 0.94
LDB1Q86U70 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.9■□□□□ 0.94
LDB1Q86U70 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LDB1Q86U70 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.9■□□□□ 0.94
LDB1Q86U70 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LDB1Q86U70 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDB1Q86U70 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDB1Q86U70 AC061975.6-201ENST00000579045 1553 ntBASIC20.89■□□□□ 0.94
LDB1Q86U70 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDB1Q86U70 KRT87P-202ENST00000534226 1464 ntBASIC20.89■□□□□ 0.94
LDB1Q86U70 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
LDB1Q86U70 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDB1Q86U70 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
LDB1Q86U70 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.89■□□□□ 0.93
LDB1Q86U70 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LDB1Q86U70 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.89■□□□□ 0.93
LDB1Q86U70 CCDC92B-201ENST00000575506 885 ntBASIC20.89■□□□□ 0.93
LDB1Q86U70 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.89■□□□□ 0.93
LDB1Q86U70 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LDB1Q86U70 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LDB1Q86U70 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.89■□□□□ 0.93
LDB1Q86U70 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LDB1Q86U70 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDB1Q86U70 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDB1Q86U70 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDB1Q86U70 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB1Q86U70 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB1Q86U70 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LDB1Q86U70 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB1Q86U70 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.88■□□□□ 0.93
LDB1Q86U70 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB1Q86U70 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LDB1Q86U70 AC123595.1-201ENST00000440769 1046 ntBASIC20.88■□□□□ 0.93
LDB1Q86U70 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.88■□□□□ 0.93
LDB1Q86U70 TERF1P2-201ENST00000583350 1212 ntBASIC20.88■□□□□ 0.93
LDB1Q86U70 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB1Q86U70 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.88■□□□□ 0.93
LDB1Q86U70 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.88■□□□□ 0.93
LDB1Q86U70 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
LDB1Q86U70 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.88■□□□□ 0.93
LDB1Q86U70 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.88■□□□□ 0.93
LDB1Q86U70 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LDB1Q86U70 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDB1Q86U70 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB1Q86U70 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB1Q86U70 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.87■□□□□ 0.93
LDB1Q86U70 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LDB1Q86U70 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LDB1Q86U70 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB1Q86U70 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB1Q86U70 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LDB1Q86U70 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.87■□□□□ 0.93
LDB1Q86U70 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LDB1Q86U70 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.87■□□□□ 0.93
LDB1Q86U70 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.87■□□□□ 0.93
LDB1Q86U70 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.87■□□□□ 0.93
LDB1Q86U70 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB1Q86U70 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB1Q86U70 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDB1Q86U70 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.87■□□□□ 0.93
LDB1Q86U70 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LDB1Q86U70 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LDB1Q86U70 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.86■□□□□ 0.93
LDB1Q86U70 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LDB1Q86U70 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LDB1Q86U70 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.86■□□□□ 0.93
LDB1Q86U70 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LDB1Q86U70 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.86■□□□□ 0.93
LDB1Q86U70 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LDB1Q86U70 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LDB1Q86U70 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
LDB1Q86U70 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LDB1Q86U70 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.85■□□□□ 0.93
LDB1Q86U70 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.85■□□□□ 0.93
LDB1Q86U70 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.85■□□□□ 0.93
LDB1Q86U70 KRT18P14-201ENST00000534205 1250 ntBASIC20.85■□□□□ 0.93
LDB1Q86U70 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDB1Q86U70 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDB1Q86U70 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDB1Q86U70 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LDB1Q86U70 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDB1Q86U70 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LDB1Q86U70 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDB1Q86U70 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms