Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHMP1BQ7LBR1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 KRT87P-202ENST00000534226 1464 ntBASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP1BQ7LBR1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 AC137761.2-201ENST00000561729 223 ntBASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 AC145350.3-201ENST00000569033 163 ntBASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP1BQ7LBR1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 AC004854.2-201ENST00000608450 1441 ntBASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 AP004607.4-201ENST00000530158 1459 ntBASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP1BQ7LBR1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP1BQ7LBR1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP1BQ7LBR1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms