Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCHD4Q6ZW05 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 AL138724.1-201ENST00000606771 1088 ntBASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 AC087239.1-201ENST00000622671 572 ntBASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PTCHD4Q6ZW05 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCHD4Q6ZW05 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
PTCHD4Q6ZW05 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 DUX4L19-201ENST00000557448 1267 ntBASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 AC136469.2-201ENST00000623944 1028 ntBASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PTCHD4Q6ZW05 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 SLC47A1P1-202ENST00000449666 945 ntBASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCHD4Q6ZW05 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 AC011298.3-201ENST00000615796 283 ntBASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCHD4Q6ZW05 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms