Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.85■■□□□ 1.09
RFWD3Q6PCD5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RFWD3Q6PCD5 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.85■■□□□ 1.09
RFWD3Q6PCD5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFWD3Q6PCD5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFWD3Q6PCD5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.85■■□□□ 1.09
RFWD3Q6PCD5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.85■■□□□ 1.09
RFWD3Q6PCD5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFWD3Q6PCD5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 MFSD11-216ENST00000590393 1141 ntBASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 AC073111.5-205ENST00000641717 521 ntBASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFWD3Q6PCD5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.83■■□□□ 1.09
RFWD3Q6PCD5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.83■■□□□ 1.09
RFWD3Q6PCD5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.83■■□□□ 1.09
RFWD3Q6PCD5 CDCA4P2-201ENST00000441182 718 ntBASIC21.83■■□□□ 1.09
RFWD3Q6PCD5 SLC7A5P2-201ENST00000553010 536 ntBASIC21.83■■□□□ 1.09
RFWD3Q6PCD5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.83■■□□□ 1.09
RFWD3Q6PCD5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.83■■□□□ 1.09
RFWD3Q6PCD5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFWD3Q6PCD5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFWD3Q6PCD5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 MYCNOS-205ENST00000641950 531 ntBASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFWD3Q6PCD5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFWD3Q6PCD5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.81■■□□□ 1.08
RFWD3Q6PCD5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RFWD3Q6PCD5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.81■■□□□ 1.08
RFWD3Q6PCD5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFWD3Q6PCD5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFWD3Q6PCD5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFWD3Q6PCD5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFWD3Q6PCD5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFWD3Q6PCD5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 RAP2CP1-201ENST00000605103 478 ntBASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFWD3Q6PCD5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFWD3Q6PCD5 C11orf96-202ENST00000528572 1834 ntBASIC21.78■■□□□ 1.08
RFWD3Q6PCD5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.78■■□□□ 1.08
RFWD3Q6PCD5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms