Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CDC42BPAQ5VT25 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
CDC42BPAQ5VT25 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC32.07■■■□□ 2.72
CDC42BPAQ5VT25 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
CDC42BPAQ5VT25 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC32.07■■■□□ 2.72
CDC42BPAQ5VT25 AC233263.1-201ENST00000578059 224 ntBASIC32.07■■■□□ 2.72
CDC42BPAQ5VT25 AC069544.1-201ENST00000609399 999 ntBASIC32.07■■■□□ 2.72
CDC42BPAQ5VT25 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 AC007322.3-201ENST00000426526 701 ntBASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 AP006294.2-201ENST00000641667 209 ntBASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 AC068473.5-201ENST00000616428 2072 ntBASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPAQ5VT25 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
CDC42BPAQ5VT25 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
CDC42BPAQ5VT25 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
CDC42BPAQ5VT25 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDC42BPAQ5VT25 RNF121-214ENST00000533380 870 ntTSL 3 BASIC32.05■■■□□ 2.72
CDC42BPAQ5VT25 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC32.05■■■□□ 2.72
CDC42BPAQ5VT25 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDC42BPAQ5VT25 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDC42BPAQ5VT25 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CDC42BPAQ5VT25 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CDC42BPAQ5VT25 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CDC42BPAQ5VT25 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CDC42BPAQ5VT25 FAM99A-202ENST00000538190 1989 ntBASIC32.04■■■□□ 2.72
CDC42BPAQ5VT25 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CDC42BPAQ5VT25 AC080038.3-201ENST00000623346 1952 ntBASIC32.04■■■□□ 2.72
CDC42BPAQ5VT25 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CDC42BPAQ5VT25 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC32.04■■■□□ 2.72
CDC42BPAQ5VT25 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 MCRIP2P1-201ENST00000394346 511 ntBASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 HLA-B-256ENST00000639848 1089 ntBASIC32.03■■■□□ 2.72
CDC42BPAQ5VT25 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 PTPA-214ENST00000423100 988 ntTSL 2 BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 VMO1-204ENST00000441199 741 ntTSL 2 BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 AC008550.1-201ENST00000511500 884 ntBASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CDC42BPAQ5VT25 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CDC42BPAQ5VT25 AC010542.4-201ENST00000563151 1910 ntBASIC32.01■■■□□ 2.72
CDC42BPAQ5VT25 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
CDC42BPAQ5VT25 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC32.01■■■□□ 2.72
CDC42BPAQ5VT25 SLC29A4P2-201ENST00000504749 1089 ntBASIC32.01■■■□□ 2.72
CDC42BPAQ5VT25 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
CDC42BPAQ5VT25 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 AC105020.6-201ENST00000621523 1217 ntBASIC32■■■□□ 2.71
CDC42BPAQ5VT25 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms