Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
COL13A1Q5TAT6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
COL13A1Q5TAT6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL13A1Q5TAT6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL13A1Q5TAT6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.07■■□□□ 1.44
COL13A1Q5TAT6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.07■■□□□ 1.44
COL13A1Q5TAT6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL13A1Q5TAT6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.07■■□□□ 1.44
COL13A1Q5TAT6 AC010947.1-201ENST00000623454 693 ntBASIC24.07■■□□□ 1.44
COL13A1Q5TAT6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL13A1Q5TAT6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL13A1Q5TAT6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 FDX1P1-201ENST00000449115 551 ntBASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 AL589743.5-201ENST00000616611 1050 ntBASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 OR7E47P-201ENST00000546390 1422 ntBASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 AC087633.2-202ENST00000565166 1439 ntBASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL13A1Q5TAT6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 AC022616.7-201ENST00000525383 220 ntBASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 AC093458.2-201ENST00000623150 629 ntBASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL13A1Q5TAT6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 LIN28AP1-201ENST00000429574 405 ntBASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 AC145676.1-201ENST00000514988 2004 ntBASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.04■■□□□ 1.44
COL13A1Q5TAT6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 AC027702.1-201ENST00000563810 1770 ntBASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 UNC93B2-201ENST00000285383 730 ntBASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 AL031133.1-201ENST00000406807 723 ntBASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.03■■□□□ 1.44
COL13A1Q5TAT6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.02■■□□□ 1.44
COL13A1Q5TAT6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
COL13A1Q5TAT6 HLA-L-211ENST00000482052 1765 ntBASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 MYC-208ENST00000641036 567 ntBASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 AC010501.1-201ENST00000606270 1962 ntBASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL13A1Q5TAT6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24■■□□□ 1.43
COL13A1Q5TAT6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL13A1Q5TAT6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
COL13A1Q5TAT6 FAM197Y1-201ENST00000421178 764 ntBASIC24■■□□□ 1.43
COL13A1Q5TAT6 HCG4P8-203ENST00000443049 980 ntBASIC24■■□□□ 1.43
COL13A1Q5TAT6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL13A1Q5TAT6 AF186192.3-201ENST00000583427 947 ntBASIC24■■□□□ 1.43
COL13A1Q5TAT6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms