Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
PDS5AQ29RF7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 AC010980.2-201ENST00000587099 1412 ntBASIC25.3■■□□□ 1.64
PDS5AQ29RF7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDS5AQ29RF7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 KRT18P6-201ENST00000555540 1265 ntBASIC25.29■■□□□ 1.64
PDS5AQ29RF7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PDS5AQ29RF7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.28■■□□□ 1.64
PDS5AQ29RF7 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.28■■□□□ 1.64
PDS5AQ29RF7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 AC100791.3-201ENST00000617619 330 ntBASIC25.28■■□□□ 1.64
PDS5AQ29RF7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDS5AQ29RF7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.27■■□□□ 1.64
PDS5AQ29RF7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.27■■□□□ 1.64
PDS5AQ29RF7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PDS5AQ29RF7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.27■■□□□ 1.64
PDS5AQ29RF7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDS5AQ29RF7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDS5AQ29RF7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDS5AQ29RF7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDS5AQ29RF7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDS5AQ29RF7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.26■■□□□ 1.63
PDS5AQ29RF7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.26■■□□□ 1.63
PDS5AQ29RF7 CD99P1-205ENST00000527459 561 ntBASIC25.26■■□□□ 1.63
PDS5AQ29RF7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.26■■□□□ 1.63
PDS5AQ29RF7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.26■■□□□ 1.63
PDS5AQ29RF7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.26■■□□□ 1.63
PDS5AQ29RF7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 CDV3P1-201ENST00000471403 739 ntBASIC25.25■■□□□ 1.63
PDS5AQ29RF7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.25■■□□□ 1.63
PDS5AQ29RF7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDS5AQ29RF7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.24■■□□□ 1.63
PDS5AQ29RF7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.24■■□□□ 1.63
PDS5AQ29RF7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.24■■□□□ 1.63
PDS5AQ29RF7 MYC-209ENST00000641252 345 ntBASIC25.24■■□□□ 1.63
PDS5AQ29RF7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PDS5AQ29RF7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.24■■□□□ 1.63
PDS5AQ29RF7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.24■■□□□ 1.63
PDS5AQ29RF7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms