Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 CYP2T3P-201ENST00000601990 817 ntBASIC20.8■□□□□ 0.92
SF3A2Q15428 LINC01023-201ENST00000606054 436 ntBASIC20.8■□□□□ 0.92
SF3A2Q15428 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.8■□□□□ 0.92
SF3A2Q15428 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SF3A2Q15428 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SF3A2Q15428 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.79■□□□□ 0.92
SF3A2Q15428 LINC01960-201ENST00000563759 1884 ntBASIC20.79■□□□□ 0.92
SF3A2Q15428 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
SF3A2Q15428 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SF3A2Q15428 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SF3A2Q15428 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SF3A2Q15428 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.79■□□□□ 0.92
SF3A2Q15428 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.79■□□□□ 0.92
SF3A2Q15428 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.79■□□□□ 0.92
SF3A2Q15428 AL034346.1-201ENST00000568244 1277 ntBASIC20.79■□□□□ 0.92
SF3A2Q15428 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SF3A2Q15428 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.79■□□□□ 0.92
SF3A2Q15428 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SF3A2Q15428 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SF3A2Q15428 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SF3A2Q15428 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SF3A2Q15428 KRT17P1-201ENST00000399211 1546 ntBASIC20.78■□□□□ 0.92
SF3A2Q15428 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SF3A2Q15428 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SF3A2Q15428 ABCB10P4-201ENST00000566803 2184 ntBASIC20.78■□□□□ 0.92
SF3A2Q15428 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.78■□□□□ 0.92
SF3A2Q15428 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.78■□□□□ 0.92
SF3A2Q15428 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SF3A2Q15428 AL355472.2-201ENST00000422958 438 ntBASIC20.78■□□□□ 0.92
SF3A2Q15428 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SF3A2Q15428 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SF3A2Q15428 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.78■□□□□ 0.92
SF3A2Q15428 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.78■□□□□ 0.92
SF3A2Q15428 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.78■□□□□ 0.92
SF3A2Q15428 AC060766.5-201ENST00000590539 871 ntBASIC20.78■□□□□ 0.92
SF3A2Q15428 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.78■□□□□ 0.92
SF3A2Q15428 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.78■□□□□ 0.92
SF3A2Q15428 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SF3A2Q15428 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SF3A2Q15428 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SF3A2Q15428 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SF3A2Q15428 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SF3A2Q15428 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.78■□□□□ 0.92
SF3A2Q15428 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SF3A2Q15428 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
SF3A2Q15428 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SF3A2Q15428 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SF3A2Q15428 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SF3A2Q15428 POU5F1P4-201ENST00000413175 1085 ntBASIC20.77■□□□□ 0.92
SF3A2Q15428 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.77■□□□□ 0.92
SF3A2Q15428 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.77■□□□□ 0.92
SF3A2Q15428 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SF3A2Q15428 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.77■□□□□ 0.92
SF3A2Q15428 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SF3A2Q15428 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SF3A2Q15428 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SF3A2Q15428 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SF3A2Q15428 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.77■□□□□ 0.92
SF3A2Q15428 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SF3A2Q15428 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SF3A2Q15428 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SF3A2Q15428 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.76■□□□□ 0.91
SF3A2Q15428 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SF3A2Q15428 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SF3A2Q15428 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.76■□□□□ 0.91
SF3A2Q15428 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SF3A2Q15428 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SF3A2Q15428 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.76■□□□□ 0.91
SF3A2Q15428 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.76■□□□□ 0.91
SF3A2Q15428 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SF3A2Q15428 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SF3A2Q15428 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SF3A2Q15428 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.76■□□□□ 0.91
SF3A2Q15428 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SF3A2Q15428 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SF3A2Q15428 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SF3A2Q15428 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SF3A2Q15428 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SF3A2Q15428 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.75■□□□□ 0.91
SF3A2Q15428 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.75■□□□□ 0.91
SF3A2Q15428 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.75■□□□□ 0.91
SF3A2Q15428 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.75■□□□□ 0.91
SF3A2Q15428 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SF3A2Q15428 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SF3A2Q15428 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
SF3A2Q15428 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.75■□□□□ 0.91
SF3A2Q15428 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SF3A2Q15428 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SF3A2Q15428 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SF3A2Q15428 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SF3A2Q15428 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SF3A2Q15428 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SF3A2Q15428 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.74■□□□□ 0.91
SF3A2Q15428 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SF3A2Q15428 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SF3A2Q15428 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SF3A2Q15428 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SF3A2Q15428 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.74■□□□□ 0.91
SF3A2Q15428 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.74■□□□□ 0.91
SF3A2Q15428 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms