Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN8P56748 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CLDN8P56748 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN8P56748 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN8P56748 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN8P56748 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN8P56748 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN8P56748 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN8P56748 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN8P56748 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN8P56748 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN8P56748 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN8P56748 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN8P56748 EDA-201ENST00000338901 1233 ntBASIC19.94■□□□□ 0.78
CLDN8P56748 MIR572-201ENST00000384983 95 ntBASIC19.94■□□□□ 0.78
CLDN8P56748 AP001330.3-201ENST00000520123 633 ntBASIC19.94■□□□□ 0.78
CLDN8P56748 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.94■□□□□ 0.78
CLDN8P56748 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLDN8P56748 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN8P56748 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN8P56748 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN8P56748 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN8P56748 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN8P56748 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN8P56748 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN8P56748 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN8P56748 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLDN8P56748 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.93■□□□□ 0.78
CLDN8P56748 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN8P56748 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN8P56748 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN8P56748 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CLDN8P56748 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN8P56748 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN8P56748 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLDN8P56748 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN8P56748 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.92■□□□□ 0.78
CLDN8P56748 AC121338.2-201ENST00000622535 1744 ntBASIC19.92■□□□□ 0.78
CLDN8P56748 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CLDN8P56748 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN8P56748 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN8P56748 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN8P56748 RASA4CP-201ENST00000424092 1398 ntBASIC19.92■□□□□ 0.78
CLDN8P56748 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN8P56748 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN8P56748 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN8P56748 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLDN8P56748 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN8P56748 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN8P56748 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN8P56748 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.91■□□□□ 0.78
CLDN8P56748 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN8P56748 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN8P56748 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN8P56748 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN8P56748 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN8P56748 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.91■□□□□ 0.78
CLDN8P56748 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN8P56748 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.91■□□□□ 0.78
CLDN8P56748 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN8P56748 AL355001.2-201ENST00000620617 1191 ntBASIC19.91■□□□□ 0.78
CLDN8P56748 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CLDN8P56748 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLDN8P56748 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN8P56748 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN8P56748 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN8P56748 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CLDN8P56748 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CLDN8P56748 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN8P56748 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN8P56748 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN8P56748 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLDN8P56748 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN8P56748 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN8P56748 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.9■□□□□ 0.78
CLDN8P56748 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CLDN8P56748 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN8P56748 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN8P56748 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN8P56748 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN8P56748 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLDN8P56748 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN8P56748 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN8P56748 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN8P56748 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CLDN8P56748 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN8P56748 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN8P56748 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN8P56748 MIR939-201ENST00000401314 82 ntBASIC19.89■□□□□ 0.77
CLDN8P56748 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN8P56748 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms