Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDH11P55287 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDH11P55287 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDH11P55287 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH11P55287 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDH11P55287 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH11P55287 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDH11P55287 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH11P55287 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH11P55287 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH11P55287 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH11P55287 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
CDH11P55287 AC087623.3-201ENST00000607047 1098 ntBASIC19.12■□□□□ 0.65
CDH11P55287 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH11P55287 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH11P55287 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CDH11P55287 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CDH11P55287 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH11P55287 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH11P55287 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH11P55287 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH11P55287 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH11P55287 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH11P55287 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH11P55287 AC010525.1-201ENST00000585559 441 ntBASIC19.11■□□□□ 0.65
CDH11P55287 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH11P55287 AC087239.1-201ENST00000622671 572 ntBASIC19.11■□□□□ 0.65
CDH11P55287 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH11P55287 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH11P55287 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
CDH11P55287 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDH11P55287 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH11P55287 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH11P55287 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH11P55287 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH11P55287 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH11P55287 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDH11P55287 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDH11P55287 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.1■□□□□ 0.65
CDH11P55287 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH11P55287 AC092666.2-201ENST00000613287 246 ntBASIC19.1■□□□□ 0.65
CDH11P55287 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH11P55287 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH11P55287 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH11P55287 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH11P55287 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH11P55287 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH11P55287 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH11P55287 LINC01006-201ENST00000333319 2292 ntBASIC19.09■□□□□ 0.65
CDH11P55287 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH11P55287 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 AL049796.1-201ENST00000565336 1766 ntBASIC19.09■□□□□ 0.65
CDH11P55287 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CDH11P55287 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH11P55287 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH11P55287 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH11P55287 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH11P55287 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH11P55287 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDH11P55287 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH11P55287 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH11P55287 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CDH11P55287 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CDH11P55287 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH11P55287 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms