Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.76■□□□□ 0.75
CASP9P55211 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CASP9P55211 EDA-201ENST00000338901 1233 ntBASIC19.76■□□□□ 0.75
CASP9P55211 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
CASP9P55211 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.76■□□□□ 0.75
CASP9P55211 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CASP9P55211 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.76■□□□□ 0.75
CASP9P55211 AL139246.5-201ENST00000606645 996 ntBASIC19.76■□□□□ 0.75
CASP9P55211 AL355001.2-201ENST00000620617 1191 ntBASIC19.76■□□□□ 0.75
CASP9P55211 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CASP9P55211 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.76■□□□□ 0.75
CASP9P55211 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP9P55211 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP9P55211 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.75■□□□□ 0.75
CASP9P55211 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.75■□□□□ 0.75
CASP9P55211 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.75■□□□□ 0.75
CASP9P55211 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CASP9P55211 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.75■□□□□ 0.75
CASP9P55211 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASP9P55211 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP9P55211 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CASP9P55211 MIR939-201ENST00000401314 82 ntBASIC19.75■□□□□ 0.75
CASP9P55211 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.75■□□□□ 0.75
CASP9P55211 AL031432.3-201ENST00000607698 485 ntBASIC19.75■□□□□ 0.75
CASP9P55211 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASP9P55211 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP9P55211 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP9P55211 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.75■□□□□ 0.75
CASP9P55211 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASP9P55211 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP9P55211 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.74■□□□□ 0.75
CASP9P55211 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP9P55211 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP9P55211 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP9P55211 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.74■□□□□ 0.75
CASP9P55211 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.74■□□□□ 0.75
CASP9P55211 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.74■□□□□ 0.75
CASP9P55211 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.74■□□□□ 0.75
CASP9P55211 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.74■□□□□ 0.75
CASP9P55211 AL136967.2-201ENST00000623968 743 ntBASIC19.74■□□□□ 0.75
CASP9P55211 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP9P55211 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.74■□□□□ 0.75
CASP9P55211 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.74■□□□□ 0.75
CASP9P55211 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CASP9P55211 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASP9P55211 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP9P55211 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP9P55211 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.74■□□□□ 0.75
CASP9P55211 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP9P55211 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.74■□□□□ 0.75
CASP9P55211 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP9P55211 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.73■□□□□ 0.75
CASP9P55211 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.73■□□□□ 0.75
CASP9P55211 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CASP9P55211 RASA4CP-201ENST00000424092 1398 ntBASIC19.73■□□□□ 0.75
CASP9P55211 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.73■□□□□ 0.75
CASP9P55211 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.73■□□□□ 0.75
CASP9P55211 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP9P55211 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.73■□□□□ 0.75
CASP9P55211 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.73■□□□□ 0.75
CASP9P55211 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.73■□□□□ 0.75
CASP9P55211 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.73■□□□□ 0.75
CASP9P55211 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP9P55211 SLC25A24-204ENST00000569674 2357 ntBASIC19.73■□□□□ 0.75
CASP9P55211 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CASP9P55211 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP9P55211 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP9P55211 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP9P55211 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CASP9P55211 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP9P55211 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.73■□□□□ 0.75
CASP9P55211 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CASP9P55211 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP9P55211 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.72■□□□□ 0.75
CASP9P55211 AC055733.4-201ENST00000638462 1354 ntBASIC19.72■□□□□ 0.75
CASP9P55211 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CASP9P55211 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP9P55211 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP9P55211 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP9P55211 AC009237.3-201ENST00000393279 1427 ntBASIC19.72■□□□□ 0.75
CASP9P55211 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.72■□□□□ 0.75
CASP9P55211 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.72■□□□□ 0.75
CASP9P55211 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.72■□□□□ 0.75
CASP9P55211 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP9P55211 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASP9P55211 AC005224.4-201ENST00000583262 1652 ntBASIC19.71■□□□□ 0.75
CASP9P55211 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CASP9P55211 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP9P55211 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP9P55211 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP9P55211 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.71■□□□□ 0.75
CASP9P55211 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms