Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 RPF2YKR081C 1035 nt2.39□□□□□ -2.03
SSU72P53538 ERV41YML067C 1059 nt2.39□□□□□ -2.03
SSU72P53538 YBL028CYBL028C 321 nt2.39□□□□□ -2.03
SSU72P53538 TPK2YPL203W 1143 nt2.39□□□□□ -2.03
SSU72P53538 DIM1YPL266W 957 nt2.39□□□□□ -2.03
SSU72P53538 CBP6YBR120C 489 nt2.39□□□□□ -2.03
SSU72P53538 AME1YBR211C 975 nt2.39□□□□□ -2.03
SSU72P53538 HEH2YDR458C 1992 nt2.39□□□□□ -2.03
SSU72P53538 GCD6YDR211W 2139 nt2.39□□□□□ -2.03
SSU72P53538 YKL222CYKL222C 2118 nt2.39□□□□□ -2.03
SSU72P53538 ILS1YBL076C 3219 nt2.39□□□□□ -2.03
SSU72P53538 NMD2YHR077C 3270 nt2.38□□□□□ -2.03
SSU72P53538 YDR131CYDR131C 1671 nt2.38□□□□□ -2.03
SSU72P53538 YGR114CYGR114C 390 nt2.38□□□□□ -2.03
SSU72P53538 MRPL9YGR220C 810 nt2.38□□□□□ -2.03
SSU72P53538 MPC3YGR243W 441 nt2.38□□□□□ -2.03
SSU72P53538 YHR097CYHR097C 1101 nt2.38□□□□□ -2.03
SSU72P53538 YIL161WYIL161W 708 nt2.38□□□□□ -2.03
SSU72P53538 SYS1YJL004C 612 nt2.38□□□□□ -2.03
SSU72P53538 YAL034C-BYAL034C-B 354 nt2.38□□□□□ -2.03
SSU72P53538 YLR198CYLR198C 360 nt2.38□□□□□ -2.03
SSU72P53538 SAM37YMR060C 984 nt2.38□□□□□ -2.03
SSU72P53538 ATP3YBR039W 936 nt2.38□□□□□ -2.03
SSU72P53538 ERV15YBR210W 429 nt2.38□□□□□ -2.03
SSU72P53538 YOR296WYOR296W 3870 nt2.38□□□□□ -2.03
SSU72P53538 YDR034C-CYDR034C-C 1317 nt2.38□□□□□ -2.03
SSU72P53538 YLR410W-AYLR410W-A 1317 nt2.38□□□□□ -2.03
SSU72P53538 MPS1YDL028C 2295 nt2.38□□□□□ -2.03
SSU72P53538 CEP3YMR168C 1827 nt2.38□□□□□ -2.03
SSU72P53538 YBT1YLL048C 4986 nt2.37□□□□□ -2.03
SSU72P53538 YGL041W-AYGL041W-A 465 nt2.37□□□□□ -2.03
SSU72P53538 PSF2YJL072C 642 nt2.37□□□□□ -2.03
SSU72P53538 YKR033CYKR033C 426 nt2.37□□□□□ -2.03
SSU72P53538 RPL15AYLR029C 615 nt2.37□□□□□ -2.03
SSU72P53538 YMR194C-AYMR194C-A 225 nt2.37□□□□□ -2.03
SSU72P53538 FMP41YNL168C 780 nt2.37□□□□□ -2.03
SSU72P53538 YOL162WYOL162W 648 nt2.37□□□□□ -2.03
SSU72P53538 MCT1YOR221C 1083 nt2.37□□□□□ -2.03
SSU72P53538 RPL33AYPL143W 324 nt2.37□□□□□ -2.03
SSU72P53538 RRG8YPR116W 834 nt2.37□□□□□ -2.03
SSU72P53538 snR44snR44 211 nt2.37□□□□□ -2.03
SSU72P53538 GYP7YDL234C 2241 nt2.37□□□□□ -2.03
SSU72P53538 BI3Q0115 1554 nt2.36□□□□□ -2.03
SSU72P53538 ERG11YHR007C 1593 nt2.36□□□□□ -2.03
SSU72P53538 WHI3YNL197C 1986 nt2.36□□□□□ -2.03
SSU72P53538 RIM1YCR028C-A 408 nt2.36□□□□□ -2.03
SSU72P53538 PPH3YDR075W 927 nt2.36□□□□□ -2.03
SSU72P53538 YHL006W-AYHL006W-A 354 nt2.36□□□□□ -2.03
SSU72P53538 MMF1YIL051C 438 nt2.36□□□□□ -2.03
SSU72P53538 YIR021W-AYIR021W-A 213 nt2.36□□□□□ -2.03
SSU72P53538 YPR050CYPR050C 414 nt2.36□□□□□ -2.03
SSU72P53538 CTP1YBR291C 900 nt2.36□□□□□ -2.03
SSU72P53538 MDM10YAL010C 1482 nt2.36□□□□□ -2.03
SSU72P53538 ROG1YGL144C 2058 nt2.36□□□□□ -2.03
SSU72P53538 TLC1TLC1 1301 nt2.36□□□□□ -2.03
SSU72P53538 MAK11YKL021C 1407 nt2.35□□□□□ -2.03
SSU72P53538 CWH41YGL027C 2502 nt2.35□□□□□ -2.03
SSU72P53538 YGL176CYGL176C 1665 nt2.35□□□□□ -2.03
SSU72P53538 DSE1YER124C 1722 nt2.35□□□□□ -2.03
SSU72P53538 ERV1YGR029W 570 nt2.35□□□□□ -2.03
SSU72P53538 CUP1-1YHR053C 186 nt2.35□□□□□ -2.03
SSU72P53538 CUP1-2YHR055C 186 nt2.35□□□□□ -2.03
SSU72P53538 YLR400WYLR400W 474 nt2.35□□□□□ -2.03
SSU72P53538 SMA2YML066C 1110 nt2.35□□□□□ -2.03
SSU72P53538 YMR099CYMR099C 894 nt2.35□□□□□ -2.03
SSU72P53538 RPL25YOL127W 429 nt2.35□□□□□ -2.03
SSU72P53538 ECM21YBL101C 3354 nt2.35□□□□□ -2.03
SSU72P53538 ARP9YMR033W 1404 nt2.34□□□□□ -2.03
SSU72P53538 PBS2YJL128C 2007 nt2.34□□□□□ -2.03
SSU72P53538 UBC9YDL064W 474 nt2.34□□□□□ -2.03
SSU72P53538 YDR090CYDR090C 933 nt2.34□□□□□ -2.03
SSU72P53538 RGI1YER067W 486 nt2.34□□□□□ -2.03
SSU72P53538 SMX2YFL017W-A 234 nt2.34□□□□□ -2.03
SSU72P53538 YGR111WYGR111W 1203 nt2.34□□□□□ -2.03
SSU72P53538 LSM8YJR022W 330 nt2.34□□□□□ -2.03
SSU72P53538 CDC5YMR001C 2118 nt2.34□□□□□ -2.03
SSU72P53538 ECM13YBL043W 774 nt2.34□□□□□ -2.03
SSU72P53538 YOL057WYOL057W 2136 nt2.34□□□□□ -2.03
SSU72P53538 TIM12YBR091C 330 nt2.34□□□□□ -2.03
SSU72P53538 APA1YCL050C 966 nt2.34□□□□□ -2.03
SSU72P53538 FAA2YER015W 2235 nt2.34□□□□□ -2.04
SSU72P53538 MSH4YFL003C 2637 nt2.34□□□□□ -2.04
SSU72P53538 DBP10YDL031W 2988 nt2.34□□□□□ -2.04
SSU72P53538 IRC3YDR332W 2070 nt2.33□□□□□ -2.04
SSU72P53538 BOI1YBL085W 2943 nt2.33□□□□□ -2.04
SSU72P53538 ART10YLR392C 1557 nt2.33□□□□□ -2.04
SSU72P53538 MRP10YDL045W-A 288 nt2.33□□□□□ -2.04
SSU72P53538 HMO1YDR174W 741 nt2.33□□□□□ -2.04
SSU72P53538 ECM11YDR446W 909 nt2.33□□□□□ -2.04
SSU72P53538 LSM4YER112W 564 nt2.33□□□□□ -2.04
SSU72P53538 YGR107WYGR107W 450 nt2.33□□□□□ -2.04
SSU72P53538 FSH1YHR049W 732 nt2.33□□□□□ -2.04
SSU72P53538 RPL19BYBL027W 570 nt2.33□□□□□ -2.04
SSU72P53538 PET20YPL159C 762 nt2.33□□□□□ -2.04
SSU72P53538 POL30YBR088C 777 nt2.33□□□□□ -2.04
SSU72P53538 PBP2YBR233W 1242 nt2.33□□□□□ -2.04
SSU72P53538 YKR078WYKR078W 1758 nt2.33□□□□□ -2.04
SSU72P53538 NEL1YHR035W 1893 nt2.33□□□□□ -2.04
SSU72P53538 BEM4YPL161C 1902 nt2.32□□□□□ -2.04
SSU72P53538 YRB1YDR002W 606 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms