Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EFNA3P52797 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
EFNA3P52797 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.68■□□□□ 0.74
EFNA3P52797 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.68■□□□□ 0.74
EFNA3P52797 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
EFNA3P52797 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.68■□□□□ 0.74
EFNA3P52797 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.68■□□□□ 0.74
EFNA3P52797 NCF1B-203ENST00000435988 1254 ntBASIC19.68■□□□□ 0.74
EFNA3P52797 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.68■□□□□ 0.74
EFNA3P52797 AC006970.2-201ENST00000450065 779 ntBASIC19.68■□□□□ 0.74
EFNA3P52797 TERF1P5-201ENST00000477545 1207 ntBASIC19.68■□□□□ 0.74
EFNA3P52797 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.68■□□□□ 0.74
EFNA3P52797 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.68■□□□□ 0.74
EFNA3P52797 AC231657.2-201ENST00000624556 255 ntBASIC19.68■□□□□ 0.74
EFNA3P52797 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.68■□□□□ 0.74
EFNA3P52797 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EFNA3P52797 KRT16P2-201ENST00000414673 1423 ntBASIC19.68■□□□□ 0.74
EFNA3P52797 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNA3P52797 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.67■□□□□ 0.74
EFNA3P52797 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
EFNA3P52797 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNA3P52797 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
EFNA3P52797 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNA3P52797 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.67■□□□□ 0.74
EFNA3P52797 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
EFNA3P52797 AC007322.1-201ENST00000426983 750 ntBASIC19.67■□□□□ 0.74
EFNA3P52797 AC104771.1-201ENST00000603335 964 ntBASIC19.67■□□□□ 0.74
EFNA3P52797 AC005181.1-201ENST00000604782 1256 ntBASIC19.67■□□□□ 0.74
EFNA3P52797 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
EFNA3P52797 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNA3P52797 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
EFNA3P52797 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.67■□□□□ 0.74
EFNA3P52797 RBM17P2-201ENST00000616397 1405 ntBASIC19.67■□□□□ 0.74
EFNA3P52797 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EFNA3P52797 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EFNA3P52797 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
EFNA3P52797 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EFNA3P52797 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EFNA3P52797 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.66■□□□□ 0.74
EFNA3P52797 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EFNA3P52797 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
EFNA3P52797 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
EFNA3P52797 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EFNA3P52797 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.66■□□□□ 0.74
EFNA3P52797 GUSBP6-202ENST00000438529 1198 ntBASIC19.66■□□□□ 0.74
EFNA3P52797 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.66■□□□□ 0.74
EFNA3P52797 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EFNA3P52797 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.66■□□□□ 0.74
EFNA3P52797 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EFNA3P52797 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.66■□□□□ 0.74
EFNA3P52797 AC068338.2-201ENST00000563278 1430 ntBASIC19.66■□□□□ 0.74
EFNA3P52797 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
EFNA3P52797 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EFNA3P52797 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNA3P52797 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNA3P52797 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
EFNA3P52797 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
EFNA3P52797 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNA3P52797 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNA3P52797 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNA3P52797 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNA3P52797 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNA3P52797 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.65■□□□□ 0.74
EFNA3P52797 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNA3P52797 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNA3P52797 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
EFNA3P52797 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNA3P52797 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EFNA3P52797 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EFNA3P52797 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.64■□□□□ 0.74
EFNA3P52797 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.64■□□□□ 0.73
EFNA3P52797 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.64■□□□□ 0.73
EFNA3P52797 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.64■□□□□ 0.73
EFNA3P52797 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
EFNA3P52797 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.64■□□□□ 0.73
EFNA3P52797 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.64■□□□□ 0.73
EFNA3P52797 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFNA3P52797 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
EFNA3P52797 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
EFNA3P52797 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.64■□□□□ 0.73
EFNA3P52797 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFNA3P52797 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFNA3P52797 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EFNA3P52797 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
EFNA3P52797 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms