Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PRIM2P49643 AC142381.2-201ENST00000566120 298 ntBASIC19.87■□□□□ 0.77
PRIM2P49643 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PRIM2P49643 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PRIM2P49643 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.87■□□□□ 0.77
PRIM2P49643 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRIM2P49643 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRIM2P49643 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRIM2P49643 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.86■□□□□ 0.77
PRIM2P49643 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.86■□□□□ 0.77
PRIM2P49643 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.86■□□□□ 0.77
PRIM2P49643 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.86■□□□□ 0.77
PRIM2P49643 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.86■□□□□ 0.77
PRIM2P49643 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.86■□□□□ 0.77
PRIM2P49643 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.86■□□□□ 0.77
PRIM2P49643 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
PRIM2P49643 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PRIM2P49643 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PRIM2P49643 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
PRIM2P49643 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRIM2P49643 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.86■□□□□ 0.77
PRIM2P49643 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.85■□□□□ 0.77
PRIM2P49643 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.85■□□□□ 0.77
PRIM2P49643 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PRIM2P49643 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PRIM2P49643 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.85■□□□□ 0.77
PRIM2P49643 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PRIM2P49643 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.85■□□□□ 0.77
PRIM2P49643 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.85■□□□□ 0.77
PRIM2P49643 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.85■□□□□ 0.77
PRIM2P49643 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRIM2P49643 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PRIM2P49643 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PRIM2P49643 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 MIR638-201ENST00000385237 100 ntBASIC19.84■□□□□ 0.77
PRIM2P49643 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PRIM2P49643 AC005837.3-201ENST00000612163 286 ntBASIC19.84■□□□□ 0.77
PRIM2P49643 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.84■□□□□ 0.77
PRIM2P49643 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRIM2P49643 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRIM2P49643 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRIM2P49643 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PRIM2P49643 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRIM2P49643 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRIM2P49643 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
PRIM2P49643 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PRIM2P49643 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.83■□□□□ 0.77
PRIM2P49643 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.83■□□□□ 0.77
PRIM2P49643 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRIM2P49643 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRIM2P49643 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
PRIM2P49643 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRIM2P49643 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.82■□□□□ 0.76
PRIM2P49643 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PRIM2P49643 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRIM2P49643 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.82■□□□□ 0.76
PRIM2P49643 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.82■□□□□ 0.76
PRIM2P49643 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRIM2P49643 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.82■□□□□ 0.76
PRIM2P49643 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PRIM2P49643 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRIM2P49643 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.82■□□□□ 0.76
PRIM2P49643 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.82■□□□□ 0.76
PRIM2P49643 BX005040.4-201ENST00000637145 1518 ntBASIC19.81■□□□□ 0.76
PRIM2P49643 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.81■□□□□ 0.76
PRIM2P49643 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms