Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 THG1YGR024C 714 nt3.32□□□□□ -1.88
UPF3P48412 OST6YML019W 999 nt3.32□□□□□ -1.88
UPF3P48412 MRPL40YPL173W 894 nt3.32□□□□□ -1.88
UPF3P48412 RRP15YPR143W 753 nt3.32□□□□□ -1.88
UPF3P48412 SHG1YBR258C 429 nt3.32□□□□□ -1.88
UPF3P48412 ICR1ICR1 3199 nt3.32□□□□□ -1.88
UPF3P48412 DIA2YOR080W 2199 nt3.31□□□□□ -1.88
UPF3P48412 SKO1YNL167C 1944 nt3.31□□□□□ -1.88
UPF3P48412 HMO1YDR174W 741 nt3.31□□□□□ -1.88
UPF3P48412 YER046W-AYER046W-A 330 nt3.31□□□□□ -1.88
UPF3P48412 LOC1YFR001W 615 nt3.31□□□□□ -1.88
UPF3P48412 DOG2YHR043C 741 nt3.31□□□□□ -1.88
UPF3P48412 YJR037WYJR037W 384 nt3.31□□□□□ -1.88
UPF3P48412 YAL031W-AYAL031W-A 309 nt3.31□□□□□ -1.88
UPF3P48412 NBP1YLR457C 960 nt3.31□□□□□ -1.88
UPF3P48412 RPL16BYNL069C 597 nt3.31□□□□□ -1.88
UPF3P48412 RRG7YOR305W 729 nt3.31□□□□□ -1.88
UPF3P48412 YPL142CYPL142C 318 nt3.31□□□□□ -1.88
UPF3P48412 snR24snR24 89 nt3.31□□□□□ -1.88
UPF3P48412 POP7YBR167C 423 nt3.31□□□□□ -1.88
UPF3P48412 SWD3YBR175W 948 nt3.31□□□□□ -1.88
UPF3P48412 YPR022CYPR022C 3402 nt3.31□□□□□ -1.88
UPF3P48412 PFK26YIL107C 2484 nt3.31□□□□□ -1.88
UPF3P48412 FKH2YNL068C 2589 nt3.3□□□□□ -1.88
UPF3P48412 ARO1YDR127W 4767 nt3.3□□□□□ -1.88
UPF3P48412 YCR045W-AYCR045W-A 351 nt3.3□□□□□ -1.88
UPF3P48412 YDL158CYDL158C 309 nt3.3□□□□□ -1.88
UPF3P48412 YFL012WYFL012W 447 nt3.3□□□□□ -1.88
UPF3P48412 ECO1YFR027W 846 nt3.3□□□□□ -1.88
UPF3P48412 YGL039WYGL039W 1047 nt3.3□□□□□ -1.88
UPF3P48412 VEL1YGL258W 621 nt3.3□□□□□ -1.88
UPF3P48412 YJR020WYJR020W 333 nt3.3□□□□□ -1.88
UPF3P48412 ATP11YNL315C 957 nt3.3□□□□□ -1.88
UPF3P48412 MED8YBR193C 672 nt3.3□□□□□ -1.88
UPF3P48412 JJJ2YJL162C 1752 nt3.3□□□□□ -1.88
UPF3P48412 SLK19YOR195W 2466 nt3.3□□□□□ -1.88
UPF3P48412 CDH1YGL003C 1701 nt3.3□□□□□ -1.88
UPF3P48412 YCK2YNL154C 1641 nt3.3□□□□□ -1.88
UPF3P48412 RIM1YCR028C-A 408 nt3.29□□□□□ -1.88
UPF3P48412 RPS14AYCR031C 414 nt3.29□□□□□ -1.88
UPF3P48412 BSC1YDL037C 987 nt3.29□□□□□ -1.88
UPF3P48412 PGD1YGL025C 1194 nt3.29□□□□□ -1.88
UPF3P48412 MTC3YGL226W 372 nt3.29□□□□□ -1.88
UPF3P48412 YGR160WYGR160W 612 nt3.29□□□□□ -1.88
UPF3P48412 MVB12YGR206W 306 nt3.29□□□□□ -1.88
UPF3P48412 IMP1YMR150C 573 nt3.29□□□□□ -1.88
UPF3P48412 PAI3YMR174C 207 nt3.29□□□□□ -1.88
UPF3P48412 GIS2YNL255C 462 nt3.29□□□□□ -1.88
UPF3P48412 AIM4YBR194W 372 nt3.29□□□□□ -1.88
UPF3P48412 STU2YLR045C 2667 nt3.29□□□□□ -1.88
UPF3P48412 COP1YDL145C 3606 nt3.29□□□□□ -1.88
UPF3P48412 BCH1YMR237W 2175 nt3.29□□□□□ -1.88
UPF3P48412 NUP60YAR002W 1620 nt3.29□□□□□ -1.88
UPF3P48412 SRB4YER022W 2064 nt3.28□□□□□ -1.88
UPF3P48412 SRD1YCR018C 666 nt3.28□□□□□ -1.88
UPF3P48412 NSE4YDL105W 1209 nt3.28□□□□□ -1.88
UPF3P48412 RSM24YDR175C 960 nt3.28□□□□□ -1.88
UPF3P48412 YER039C-AYER039C-A 219 nt3.28□□□□□ -1.88
UPF3P48412 YFR054CYFR054C 579 nt3.28□□□□□ -1.88
UPF3P48412 YGL159WYGL159W 1113 nt3.28□□□□□ -1.88
UPF3P48412 YJL133C-AYJL133C-A 225 nt3.28□□□□□ -1.88
UPF3P48412 AIM26YKL037W 357 nt3.28□□□□□ -1.88
UPF3P48412 MBA1YBR185C 837 nt3.28□□□□□ -1.88
UPF3P48412 POL2YNL262W 6669 nt3.28□□□□□ -1.88
UPF3P48412 VPS53YJL029C 2469 nt3.28□□□□□ -1.88
UPF3P48412 YCR013CYCR013C 648 nt3.27□□□□□ -1.89
UPF3P48412 UBC13YDR092W 462 nt3.27□□□□□ -1.89
UPF3P48412 YDR203WYDR203W 318 nt3.27□□□□□ -1.89
UPF3P48412 YDR248CYDR248C 582 nt3.27□□□□□ -1.89
UPF3P48412 CDC26YFR036W 375 nt3.27□□□□□ -1.89
UPF3P48412 SRL3YKR091W 741 nt3.27□□□□□ -1.89
UPF3P48412 YNL203CYNL203C 612 nt3.27□□□□□ -1.89
UPF3P48412 YPL119C-AYPL119C-A 264 nt3.27□□□□□ -1.89
UPF3P48412 STN1YDR082W 1485 nt3.27□□□□□ -1.89
UPF3P48412 YEL025CYEL025C 3567 nt3.27□□□□□ -1.89
UPF3P48412 AGE1YDR524C 1449 nt3.27□□□□□ -1.89
UPF3P48412 MSR1YHR091C 1932 nt3.27□□□□□ -1.89
UPF3P48412 CBP2YHL038C 1893 nt3.26□□□□□ -1.89
UPF3P48412 RAD2YGR258C 3096 nt3.26□□□□□ -1.89
UPF3P48412 KRE2YDR483W 1329 nt3.26□□□□□ -1.89
UPF3P48412 SSM4YIL030C 3960 nt3.26□□□□□ -1.89
UPF3P48412 YKL100CYKL100C 1764 nt3.26□□□□□ -1.89
UPF3P48412 BRE5YNR051C 1548 nt3.26□□□□□ -1.89
UPF3P48412 HLR1YDR528W 1272 nt3.26□□□□□ -1.89
UPF3P48412 YER158W-AYER158W-A 216 nt3.26□□□□□ -1.89
UPF3P48412 PUG1YER185W 912 nt3.26□□□□□ -1.89
UPF3P48412 PEF1YGR058W 1008 nt3.26□□□□□ -1.89
UPF3P48412 LIP2YLR239C 987 nt3.26□□□□□ -1.89
UPF3P48412 RPS28BYLR264W 204 nt3.26□□□□□ -1.89
UPF3P48412 ADI1YMR009W 540 nt3.26□□□□□ -1.89
UPF3P48412 GRE2YOL151W 1029 nt3.26□□□□□ -1.89
UPF3P48412 MTR4YJL050W 3222 nt3.25□□□□□ -1.89
UPF3P48412 YIL046W-AYIL046W-A 165 nt3.25□□□□□ -1.89
UPF3P48412 ARC18YLR370C 537 nt3.25□□□□□ -1.89
UPF3P48412 BRX1YOL077C 876 nt3.25□□□□□ -1.89
UPF3P48412 MIT1YEL007W 2001 nt3.25□□□□□ -1.89
UPF3P48412 PSK1YAL017W 4071 nt3.25□□□□□ -1.89
UPF3P48412 MET5YJR137C 4329 nt3.25□□□□□ -1.89
UPF3P48412 ARK1YNL020C 1917 nt3.25□□□□□ -1.89
UPF3P48412 YFL002W-BYFL002W-B 1317 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms