Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.76■□□□□ 0.59
SOX6P35712 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX6P35712 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX6P35712 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX6P35712 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX6P35712 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX6P35712 AC026471.6-201ENST00000622954 1905 ntBASIC18.76■□□□□ 0.59
SOX6P35712 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SOX6P35712 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.76■□□□□ 0.59
SOX6P35712 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SOX6P35712 AF131216.4-201ENST00000638924 1588 ntBASIC18.76■□□□□ 0.59
SOX6P35712 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
SOX6P35712 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
SOX6P35712 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.75■□□□□ 0.59
SOX6P35712 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
SOX6P35712 DUX4L4-201ENST00000566884 1269 ntBASIC18.75■□□□□ 0.59
SOX6P35712 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.75■□□□□ 0.59
SOX6P35712 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX6P35712 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.74■□□□□ 0.59
SOX6P35712 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
SOX6P35712 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 AC006128.1-201ENST00000624704 1661 ntBASIC18.74■□□□□ 0.59
SOX6P35712 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.74■□□□□ 0.59
SOX6P35712 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.74■□□□□ 0.59
SOX6P35712 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.74■□□□□ 0.59
SOX6P35712 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX6P35712 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SOX6P35712 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.73■□□□□ 0.59
SOX6P35712 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SOX6P35712 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.73■□□□□ 0.59
SOX6P35712 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX6P35712 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.73■□□□□ 0.59
SOX6P35712 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SOX6P35712 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SOX6P35712 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SOX6P35712 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SOX6P35712 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
SOX6P35712 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.72■□□□□ 0.59
SOX6P35712 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SOX6P35712 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
SOX6P35712 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SOX6P35712 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX6P35712 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SOX6P35712 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.71■□□□□ 0.59
SOX6P35712 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms