Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.04■□□□□ 0.64
GDF1P27539 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.04■□□□□ 0.64
GDF1P27539 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.04■□□□□ 0.64
GDF1P27539 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.04■□□□□ 0.64
GDF1P27539 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GDF1P27539 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GDF1P27539 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
GDF1P27539 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GDF1P27539 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.03■□□□□ 0.64
GDF1P27539 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.03■□□□□ 0.64
GDF1P27539 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GDF1P27539 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GDF1P27539 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.03■□□□□ 0.64
GDF1P27539 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GDF1P27539 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.03■□□□□ 0.64
GDF1P27539 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GDF1P27539 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GDF1P27539 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GDF1P27539 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.02■□□□□ 0.64
GDF1P27539 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.02■□□□□ 0.64
GDF1P27539 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GDF1P27539 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GDF1P27539 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GDF1P27539 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.02■□□□□ 0.64
GDF1P27539 NCF1B-203ENST00000435988 1254 ntBASIC19.02■□□□□ 0.64
GDF1P27539 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.02■□□□□ 0.64
GDF1P27539 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.02■□□□□ 0.64
GDF1P27539 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
GDF1P27539 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.02■□□□□ 0.64
GDF1P27539 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.02■□□□□ 0.63
GDF1P27539 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDF1P27539 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDF1P27539 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDF1P27539 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDF1P27539 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDF1P27539 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDF1P27539 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDF1P27539 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GDF1P27539 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GDF1P27539 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GDF1P27539 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GDF1P27539 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GDF1P27539 GPX1P1-201ENST00000388829 606 ntBASIC19.01■□□□□ 0.63
GDF1P27539 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.01■□□□□ 0.63
GDF1P27539 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.01■□□□□ 0.63
GDF1P27539 AL121832.2-201ENST00000610979 668 ntBASIC19.01■□□□□ 0.63
GDF1P27539 AL109923.1-201ENST00000618799 583 ntBASIC19.01■□□□□ 0.63
GDF1P27539 AL050303.2-201ENST00000619798 666 ntBASIC19.01■□□□□ 0.63
GDF1P27539 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
GDF1P27539 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
GDF1P27539 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GDF1P27539 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
GDF1P27539 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19■□□□□ 0.63
GDF1P27539 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19■□□□□ 0.63
GDF1P27539 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19■□□□□ 0.63
GDF1P27539 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19■□□□□ 0.63
GDF1P27539 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
GDF1P27539 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19■□□□□ 0.63
GDF1P27539 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
GDF1P27539 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19■□□□□ 0.63
GDF1P27539 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
GDF1P27539 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19■□□□□ 0.63
GDF1P27539 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
GDF1P27539 RBM17P2-201ENST00000616397 1405 ntBASIC19■□□□□ 0.63
GDF1P27539 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GDF1P27539 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GDF1P27539 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GDF1P27539 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GDF1P27539 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GDF1P27539 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GDF1P27539 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
GDF1P27539 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.99■□□□□ 0.63
GDF1P27539 AC007322.4-201ENST00000509611 723 ntBASIC18.99■□□□□ 0.63
GDF1P27539 AC104771.1-201ENST00000603335 964 ntBASIC18.99■□□□□ 0.63
GDF1P27539 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
GDF1P27539 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.99■□□□□ 0.63
GDF1P27539 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.99■□□□□ 0.63
GDF1P27539 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms