Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.53■□□□□ 0.88
VARSP26640 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VARSP26640 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VARSP26640 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VARSP26640 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VARSP26640 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VARSP26640 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VARSP26640 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARSP26640 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARSP26640 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
VARSP26640 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.52■□□□□ 0.88
VARSP26640 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.52■□□□□ 0.88
VARSP26640 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.52■□□□□ 0.88
VARSP26640 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARSP26640 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
VARSP26640 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.52■□□□□ 0.88
VARSP26640 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
VARSP26640 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.52■□□□□ 0.88
VARSP26640 AL354811.1-201ENST00000610286 706 ntBASIC20.52■□□□□ 0.88
VARSP26640 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VARSP26640 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.52■□□□□ 0.88
VARSP26640 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
VARSP26640 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
VARSP26640 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
VARSP26640 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
VARSP26640 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 AC005224.4-201ENST00000583262 1652 ntBASIC20.51■□□□□ 0.87
VARSP26640 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.51■□□□□ 0.87
VARSP26640 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.51■□□□□ 0.87
VARSP26640 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
VARSP26640 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
VARSP26640 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.51■□□□□ 0.87
VARSP26640 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
VARSP26640 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.51■□□□□ 0.87
VARSP26640 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.51■□□□□ 0.87
VARSP26640 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.51■□□□□ 0.87
VARSP26640 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VARSP26640 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VARSP26640 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 AC055733.4-201ENST00000638462 1354 ntBASIC20.5■□□□□ 0.87
VARSP26640 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
VARSP26640 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
VARSP26640 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
VARSP26640 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.5■□□□□ 0.87
VARSP26640 FEM1AP4-201ENST00000443167 1987 ntBASIC20.5■□□□□ 0.87
VARSP26640 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.5■□□□□ 0.87
VARSP26640 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VARSP26640 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VARSP26640 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.49■□□□□ 0.87
VARSP26640 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARSP26640 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VARSP26640 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.49■□□□□ 0.87
VARSP26640 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARSP26640 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
VARSP26640 IKBKGP1-201ENST00000612193 1073 ntBASIC20.49■□□□□ 0.87
VARSP26640 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VARSP26640 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.49■□□□□ 0.87
VARSP26640 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
VARSP26640 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
VARSP26640 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
VARSP26640 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARSP26640 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
VARSP26640 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
VARSP26640 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.48■□□□□ 0.87
VARSP26640 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.48■□□□□ 0.87
VARSP26640 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
VARSP26640 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
VARSP26640 TPRG1LP1-201ENST00000598702 760 ntBASIC20.48■□□□□ 0.87
VARSP26640 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
VARSP26640 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms