Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.37■■□□□ 1.01
PTPN3P26045 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN3P26045 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN3P26045 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN3P26045 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN3P26045 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN3P26045 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.37■■□□□ 1.01
PTPN3P26045 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.37■■□□□ 1.01
PTPN3P26045 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN3P26045 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PTPN3P26045 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN3P26045 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.37■■□□□ 1.01
PTPN3P26045 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.37■■□□□ 1.01
PTPN3P26045 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
PTPN3P26045 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN3P26045 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PTPN3P26045 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PTPN3P26045 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PTPN3P26045 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.37■■□□□ 1.01
PTPN3P26045 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PTPN3P26045 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN3P26045 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PTPN3P26045 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN3P26045 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN3P26045 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.36■■□□□ 1.01
PTPN3P26045 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.36■■□□□ 1.01
PTPN3P26045 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.36■■□□□ 1.01
PTPN3P26045 AC138907.5-202ENST00000569484 235 ntBASIC21.36■■□□□ 1.01
PTPN3P26045 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.36■■□□□ 1.01
PTPN3P26045 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.36■■□□□ 1.01
PTPN3P26045 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.36■■□□□ 1.01
PTPN3P26045 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN3P26045 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PTPN3P26045 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PTPN3P26045 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN3P26045 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.36■■□□□ 1.01
PTPN3P26045 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.36■■□□□ 1.01
PTPN3P26045 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN3P26045 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN3P26045 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN3P26045 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PTPN3P26045 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN3P26045 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN3P26045 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN3P26045 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN3P26045 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN3P26045 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN3P26045 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN3P26045 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN3P26045 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN3P26045 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.34■■□□□ 1.01
PTPN3P26045 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN3P26045 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.34■■□□□ 1.01
PTPN3P26045 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.34■■□□□ 1.01
PTPN3P26045 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN3P26045 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN3P26045 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.34■■□□□ 1.01
PTPN3P26045 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.34■■□□□ 1.01
PTPN3P26045 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.34■■□□□ 1.01
PTPN3P26045 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN3P26045 AC104187.1-201ENST00000607510 612 ntBASIC21.34■■□□□ 1.01
PTPN3P26045 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PTPN3P26045 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN3P26045 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN3P26045 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.34■■□□□ 1.01
PTPN3P26045 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN3P26045 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PTPN3P26045 AP004607.4-201ENST00000530158 1459 ntBASIC21.33■■□□□ 1.01
PTPN3P26045 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN3P26045 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN3P26045 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN3P26045 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN3P26045 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN3P26045 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PTPN3P26045 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
PTPN3P26045 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.33■■□□□ 1.01
PTPN3P26045 AC008175.2-201ENST00000612840 297 ntBASIC21.33■■□□□ 1.01
PTPN3P26045 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.33■■□□□ 1.01
PTPN3P26045 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN3P26045 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.33■■□□□ 1
PTPN3P26045 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.33■■□□□ 1
PTPN3P26045 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.32■■□□□ 1
PTPN3P26045 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.32■■□□□ 1
PTPN3P26045 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.32■■□□□ 1
PTPN3P26045 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.32■■□□□ 1
PTPN3P26045 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.32■■□□□ 1
PTPN3P26045 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.32■■□□□ 1
PTPN3P26045 AC010141.2-201ENST00000452426 721 ntBASIC21.32■■□□□ 1
PTPN3P26045 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms