Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP24386 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP24386 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP24386 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP24386 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CHMP24386 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHMP24386 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP24386 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP24386 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP24386 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP24386 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP24386 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CHMP24386 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.53■□□□□ 0.72
CHMP24386 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP24386 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CHMP24386 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP24386 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP24386 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP24386 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP24386 LINC01521-201ENST00000504184 1943 ntBASIC19.53■□□□□ 0.72
CHMP24386 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP24386 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CHMP24386 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP24386 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP24386 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP24386 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
CHMP24386 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP24386 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP24386 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP24386 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CHMP24386 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP24386 TERF1P2-201ENST00000583350 1212 ntBASIC19.52■□□□□ 0.72
CHMP24386 TPRG1LP1-201ENST00000598702 760 ntBASIC19.52■□□□□ 0.72
CHMP24386 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP24386 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP24386 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.52■□□□□ 0.71
CHMP24386 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CHMP24386 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP24386 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP24386 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP24386 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CHMP24386 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP24386 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP24386 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMP24386 AL162430.1-201ENST00000480705 870 ntBASIC19.51■□□□□ 0.71
CHMP24386 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP24386 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP24386 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 AC092667.1-201ENST00000434301 2586 ntBASIC19.51■□□□□ 0.71
CHMP24386 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.51■□□□□ 0.71
CHMP24386 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP24386 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP24386 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP24386 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP24386 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CHMP24386 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMP24386 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP24386 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMP24386 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHMP24386 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP24386 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CHMP24386 CCDC92B-201ENST00000575506 885 ntBASIC19.5■□□□□ 0.71
CHMP24386 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMP24386 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP24386 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.5■□□□□ 0.71
CHMP24386 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP24386 OR7E47P-201ENST00000546390 1422 ntBASIC19.5■□□□□ 0.71
CHMP24386 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP24386 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP24386 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CHMP24386 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHMP24386 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 KRT18P14-201ENST00000534205 1250 ntBASIC19.49■□□□□ 0.71
CHMP24386 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHMP24386 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.49■□□□□ 0.71
CHMP24386 AC092666.2-201ENST00000613287 246 ntBASIC19.49■□□□□ 0.71
CHMP24386 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.49■□□□□ 0.71
CHMP24386 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHMP24386 AC009237.3-201ENST00000393279 1427 ntBASIC19.49■□□□□ 0.71
CHMP24386 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.49■□□□□ 0.71
CHMP24386 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP24386 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms