Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PRKCAP17252 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.33■□□□□ 0.68
PRKCAP17252 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRKCAP17252 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PRKCAP17252 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PRKCAP17252 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.32■□□□□ 0.68
PRKCAP17252 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PRKCAP17252 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.32■□□□□ 0.68
PRKCAP17252 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.32■□□□□ 0.68
PRKCAP17252 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.32■□□□□ 0.68
PRKCAP17252 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.32■□□□□ 0.68
PRKCAP17252 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.32■□□□□ 0.68
PRKCAP17252 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PRKCAP17252 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PRKCAP17252 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.32■□□□□ 0.68
PRKCAP17252 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PRKCAP17252 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRKCAP17252 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.32■□□□□ 0.68
PRKCAP17252 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.31■□□□□ 0.68
PRKCAP17252 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PRKCAP17252 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PRKCAP17252 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.31■□□□□ 0.68
PRKCAP17252 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.31■□□□□ 0.68
PRKCAP17252 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.31■□□□□ 0.68
PRKCAP17252 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
PRKCAP17252 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.31■□□□□ 0.68
PRKCAP17252 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRKCAP17252 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.31■□□□□ 0.68
PRKCAP17252 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRKCAP17252 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
PRKCAP17252 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
PRKCAP17252 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRKCAP17252 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
PRKCAP17252 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.3■□□□□ 0.68
PRKCAP17252 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.3■□□□□ 0.68
PRKCAP17252 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.3■□□□□ 0.68
PRKCAP17252 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.3■□□□□ 0.68
PRKCAP17252 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.3■□□□□ 0.68
PRKCAP17252 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRKCAP17252 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.3■□□□□ 0.68
PRKCAP17252 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRKCAP17252 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.3■□□□□ 0.68
PRKCAP17252 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.29■□□□□ 0.68
PRKCAP17252 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PRKCAP17252 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRKCAP17252 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.29■□□□□ 0.68
PRKCAP17252 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.29■□□□□ 0.68
PRKCAP17252 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 AC104564.3-201ENST00000582367 638 ntBASIC19.29■□□□□ 0.68
PRKCAP17252 TERF1P2-201ENST00000583350 1212 ntBASIC19.29■□□□□ 0.68
PRKCAP17252 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.29■□□□□ 0.68
PRKCAP17252 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.29■□□□□ 0.68
PRKCAP17252 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRKCAP17252 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRKCAP17252 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.28■□□□□ 0.68
PRKCAP17252 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
PRKCAP17252 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms