Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 CAB2YIL083C 1098 nt1.95□□□□□ -2.1
TY4B-HP0C2J7 AIM23YJL131C 1071 nt1.95□□□□□ -2.1
TY4B-HP0C2J7 YML094C-AYML094C-A 402 nt1.95□□□□□ -2.1
TY4B-HP0C2J7 HMT1YBR034C 1047 nt1.95□□□□□ -2.1
TY4B-HP0C2J7 NET1YJL076W 3570 nt1.95□□□□□ -2.1
TY4B-HP0C2J7 YER067C-AYER067C-A 324 nt1.94□□□□□ -2.1
TY4B-HP0C2J7 YKL165C-AYKL165C-A 234 nt1.94□□□□□ -2.1
TY4B-HP0C2J7 CDC123YLR215C 1083 nt1.94□□□□□ -2.1
TY4B-HP0C2J7 MET6YER091C 2304 nt1.94□□□□□ -2.1
TY4B-HP0C2J7 TUS1YLR425W 3924 nt1.94□□□□□ -2.1
TY4B-HP0C2J7 MAK10YEL053C 2202 nt1.94□□□□□ -2.1
TY4B-HP0C2J7 TOP2YNL088W 4287 nt1.93□□□□□ -2.1
TY4B-HP0C2J7 MIG1YGL035C 1515 nt1.93□□□□□ -2.1
TY4B-HP0C2J7 VPS8YAL002W 3825 nt1.93□□□□□ -2.1
TY4B-HP0C2J7 DNF3YMR162C 4971 nt1.93□□□□□ -2.1
TY4B-HP0C2J7 YKU80YMR106C 1890 nt1.93□□□□□ -2.1
TY4B-HP0C2J7 YEL032C-AYEL032C-A 162 nt1.93□□□□□ -2.1
TY4B-HP0C2J7 RNA1YMR235C 1224 nt1.93□□□□□ -2.1
TY4B-HP0C2J7 RGP1YDR137W 1992 nt1.93□□□□□ -2.1
TY4B-HP0C2J7 NAT1YDL040C 2565 nt1.92□□□□□ -2.1
TY4B-HP0C2J7 YLR345WYLR345W 1530 nt1.92□□□□□ -2.1
TY4B-HP0C2J7 DUF1YOL087C 3351 nt1.92□□□□□ -2.1
TY4B-HP0C2J7 UBC6YER100W 753 nt1.92□□□□□ -2.1
TY4B-HP0C2J7 GLG2YJL137C 1143 nt1.92□□□□□ -2.1
TY4B-HP0C2J7 YMR247W-AYMR247W-A 144 nt1.92□□□□□ -2.1
TY4B-HP0C2J7 PIS1YPR113W 663 nt1.92□□□□□ -2.1
TY4B-HP0C2J7 ELG1YOR144C 2376 nt1.92□□□□□ -2.1
TY4B-HP0C2J7 PCK1YKR097W 1650 nt1.92□□□□□ -2.1
TY4B-HP0C2J7 PAC1YOR269W 1485 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 HMO1YDR174W 741 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 YGR011WYGR011W 327 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 ATG34YOL083W 1239 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 SYC1YOR179C 567 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 MSH6YDR097C 3729 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 ALG11YNL048W 1647 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 YDL041WYDL041W 354 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 PML1YLR016C 615 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 NDL1YLR254C 570 nt1.91□□□□□ -2.1
TY4B-HP0C2J7 ROY1YMR258C 1662 nt1.9□□□□□ -2.1
TY4B-HP0C2J7 MEC1YBR136W 7107 nt1.9□□□□□ -2.1
TY4B-HP0C2J7 tH(GUG)E1tH(GUG)E1 72 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 tH(GUG)E2tH(GUG)E2 72 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 tH(GUG)G1tH(GUG)G1 72 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 tH(GUG)G2tH(GUG)G2 72 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 tH(GUG)HtH(GUG)H 72 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 tH(GUG)KtH(GUG)K 72 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 tH(GUG)MtH(GUG)M 72 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 ENV10YLR065C 546 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 SMP3YOR149C 1551 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 RAD50YNL250W 3939 nt1.9□□□□□ -2.11
TY4B-HP0C2J7 RIF1YBR275C 5751 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 NRG2YBR066C 663 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 YBR255C-AYBR255C-A 363 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 SPS2YDR522C 1509 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 GNT1YOR320C 1476 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 GGA1YDR358W 1674 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 CDC60YPL160W 3273 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 CPR5YDR304C 678 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 YHI9YHR029C 885 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 RUF21RUF21 707 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 RPS30BYOR182C 192 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 UBX3YDL091C 1368 nt1.89□□□□□ -2.11
TY4B-HP0C2J7 SMC1YFL008W 3678 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 YDL183CYDL183C 963 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 ATP17YDR377W 306 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 SDT1YGL224C 843 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 TAM41YGR046W 1158 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 YKR047WYKR047W 306 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 YNL035CYNL035C 1170 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 BNI1YNL271C 5862 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 MDM10YAL010C 1482 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 ART10YLR392C 1557 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 LTE1YAL024C 4308 nt1.88□□□□□ -2.11
TY4B-HP0C2J7 MGA2YIR033W 3342 nt1.87□□□□□ -2.11
TY4B-HP0C2J7 YIL102CYIL102C 306 nt1.87□□□□□ -2.11
TY4B-HP0C2J7 TRX1YLR043C 312 nt1.87□□□□□ -2.11
TY4B-HP0C2J7 OSW5YMR148W 447 nt1.87□□□□□ -2.11
TY4B-HP0C2J7 MRP10YDL045W-A 288 nt1.87□□□□□ -2.11
TY4B-HP0C2J7 UIP3YAR027W 708 nt1.87□□□□□ -2.11
TY4B-HP0C2J7 PAI3YMR174C 207 nt1.87□□□□□ -2.11
TY4B-HP0C2J7 PHO12YHR215W 1404 nt1.86□□□□□ -2.11
TY4B-HP0C2J7 PHO11YAR071W 1404 nt1.86□□□□□ -2.11
TY4B-HP0C2J7 SET4YJL105W 1683 nt1.86□□□□□ -2.11
TY4B-HP0C2J7 YDL199CYDL199C 2064 nt1.86□□□□□ -2.11
TY4B-HP0C2J7 OKP1YGR179C 1221 nt1.86□□□□□ -2.11
TY4B-HP0C2J7 NNT1YLR285W 786 nt1.86□□□□□ -2.11
TY4B-HP0C2J7 HHF2YNL030W 312 nt1.86□□□□□ -2.11
TY4B-HP0C2J7 SNU114YKL173W 3027 nt1.86□□□□□ -2.11
TY4B-HP0C2J7 KXD1YGL079W 657 nt1.85□□□□□ -2.11
TY4B-HP0C2J7 VPS71YML041C 843 nt1.85□□□□□ -2.11
TY4B-HP0C2J7 UBP8YMR223W 1416 nt1.85□□□□□ -2.11
TY4B-HP0C2J7 TRZ1YKR079C 2517 nt1.85□□□□□ -2.11
TY4B-HP0C2J7 CTR86YCR054C 1692 nt1.85□□□□□ -2.11
TY4B-HP0C2J7 YGL193CYGL193C 312 nt1.84□□□□□ -2.11
TY4B-HP0C2J7 YHR180W-AYHR180W-A 183 nt1.84□□□□□ -2.11
TY4B-HP0C2J7 CCM1YGR150C 2595 nt1.84□□□□□ -2.11
TY4B-HP0C2J7 PHO5YBR093C 1404 nt1.84□□□□□ -2.12
TY4B-HP0C2J7 YER085CYER085C 522 nt1.84□□□□□ -2.12
TY4B-HP0C2J7 AGC1YPR021C 2709 nt1.84□□□□□ -2.12
TY4B-HP0C2J7 UTP21YLR409C 2820 nt1.84□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms