Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL1A1P02452 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL1A1P02452 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL1A1P02452 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.44■■□□□ 1.66
COL1A1P02452 AL512625.2-201ENST00000417533 625 ntBASIC25.44■■□□□ 1.66
COL1A1P02452 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.44■■□□□ 1.66
COL1A1P02452 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.44■■□□□ 1.66
COL1A1P02452 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL1A1P02452 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL1A1P02452 PRORSD1P-201ENST00000295112 541 ntBASIC25.43■■□□□ 1.66
COL1A1P02452 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.43■■□□□ 1.66
COL1A1P02452 AC091799.1-201ENST00000422823 811 ntBASIC25.43■■□□□ 1.66
COL1A1P02452 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.43■■□□□ 1.66
COL1A1P02452 RARRES2P4-201ENST00000514074 484 ntBASIC25.43■■□□□ 1.66
COL1A1P02452 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.43■■□□□ 1.66
COL1A1P02452 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.43■■□□□ 1.66
COL1A1P02452 AC069236.1-201ENST00000604339 616 ntBASIC25.43■■□□□ 1.66
COL1A1P02452 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.43■■□□□ 1.66
COL1A1P02452 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC25.43■■□□□ 1.66
COL1A1P02452 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
COL1A1P02452 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL1A1P02452 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.43■■□□□ 1.66
COL1A1P02452 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.43■■□□□ 1.66
COL1A1P02452 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
COL1A1P02452 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.42■■□□□ 1.66
COL1A1P02452 AL162412.1-201ENST00000567129 965 ntBASIC25.42■■□□□ 1.66
COL1A1P02452 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.42■■□□□ 1.66
COL1A1P02452 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.42■■□□□ 1.66
COL1A1P02452 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL1A1P02452 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
COL1A1P02452 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.41■■□□□ 1.66
COL1A1P02452 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.41■■□□□ 1.66
COL1A1P02452 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.41■■□□□ 1.66
COL1A1P02452 AC083880.1-201ENST00000608266 535 ntBASIC25.41■■□□□ 1.66
COL1A1P02452 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
COL1A1P02452 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL1A1P02452 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL1A1P02452 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.41■■□□□ 1.66
COL1A1P02452 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL1A1P02452 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.41■■□□□ 1.66
COL1A1P02452 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL1A1P02452 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A1P02452 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
COL1A1P02452 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A1P02452 MYC-209ENST00000641252 345 ntBASIC25.4■■□□□ 1.66
COL1A1P02452 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A1P02452 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
COL1A1P02452 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL1A1P02452 AC098590.1-201ENST00000468126 897 ntBASIC25.4■■□□□ 1.66
COL1A1P02452 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.4■■□□□ 1.66
COL1A1P02452 AC010980.2-201ENST00000587099 1412 ntBASIC25.39■■□□□ 1.66
COL1A1P02452 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL1A1P02452 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL1A1P02452 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
COL1A1P02452 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
COL1A1P02452 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.39■■□□□ 1.65
COL1A1P02452 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.39■■□□□ 1.65
COL1A1P02452 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL1A1P02452 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL1A1P02452 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL1A1P02452 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
COL1A1P02452 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.38■■□□□ 1.65
COL1A1P02452 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL1A1P02452 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL1A1P02452 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.38■■□□□ 1.65
COL1A1P02452 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC25.38■■□□□ 1.65
COL1A1P02452 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.38■■□□□ 1.65
COL1A1P02452 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.38■■□□□ 1.65
COL1A1P02452 AL591742.1-201ENST00000604433 565 ntBASIC25.38■■□□□ 1.65
COL1A1P02452 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.38■■□□□ 1.65
COL1A1P02452 AC008694.1-202ENST00000636953 945 ntBASIC25.38■■□□□ 1.65
COL1A1P02452 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL1A1P02452 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
COL1A1P02452 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A1P02452 ECEL1P1-201ENST00000373592 1742 ntBASIC25.37■■□□□ 1.65
COL1A1P02452 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A1P02452 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A1P02452 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A1P02452 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC25.37■■□□□ 1.65
COL1A1P02452 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A1P02452 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A1P02452 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A1P02452 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A1P02452 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL1A1P02452 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.37■■□□□ 1.65
COL1A1P02452 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
COL1A1P02452 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A1P02452 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A1P02452 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms