Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDNEP1O95476 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDNEP1O95476 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDNEP1O95476 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDNEP1O95476 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.36■■□□□ 1.49
CTDNEP1O95476 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CTDNEP1O95476 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDNEP1O95476 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CTDNEP1O95476 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.35■■□□□ 1.49
CTDNEP1O95476 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CTDNEP1O95476 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.35■■□□□ 1.49
CTDNEP1O95476 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.35■■□□□ 1.49
CTDNEP1O95476 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CTDNEP1O95476 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.35■■□□□ 1.49
CTDNEP1O95476 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CTDNEP1O95476 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDNEP1O95476 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDNEP1O95476 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDNEP1O95476 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDNEP1O95476 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CTDNEP1O95476 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CTDNEP1O95476 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CTDNEP1O95476 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.34■■□□□ 1.49
CTDNEP1O95476 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.34■■□□□ 1.49
CTDNEP1O95476 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CTDNEP1O95476 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CTDNEP1O95476 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CTDNEP1O95476 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CTDNEP1O95476 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CTDNEP1O95476 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.33■■□□□ 1.49
CTDNEP1O95476 AL157384.1-201ENST00000445995 2473 ntBASIC24.33■■□□□ 1.49
CTDNEP1O95476 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CTDNEP1O95476 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.33■■□□□ 1.49
CTDNEP1O95476 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CTDNEP1O95476 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.33■■□□□ 1.49
CTDNEP1O95476 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CTDNEP1O95476 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.33■■□□□ 1.49
CTDNEP1O95476 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.33■■□□□ 1.49
CTDNEP1O95476 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.33■■□□□ 1.49
CTDNEP1O95476 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.33■■□□□ 1.49
CTDNEP1O95476 AC138907.5-202ENST00000569484 235 ntBASIC24.33■■□□□ 1.49
CTDNEP1O95476 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CTDNEP1O95476 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CTDNEP1O95476 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CTDNEP1O95476 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDNEP1O95476 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDNEP1O95476 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CTDNEP1O95476 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDNEP1O95476 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.32■■□□□ 1.48
CTDNEP1O95476 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.32■■□□□ 1.48
CTDNEP1O95476 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDNEP1O95476 KRT18P14-201ENST00000534205 1250 ntBASIC24.32■■□□□ 1.48
CTDNEP1O95476 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.32■■□□□ 1.48
CTDNEP1O95476 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CTDNEP1O95476 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDNEP1O95476 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDNEP1O95476 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CTDNEP1O95476 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTDNEP1O95476 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTDNEP1O95476 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTDNEP1O95476 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDNEP1O95476 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDNEP1O95476 AC104187.1-201ENST00000607510 612 ntBASIC24.31■■□□□ 1.48
CTDNEP1O95476 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTDNEP1O95476 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 AP004607.4-201ENST00000530158 1459 ntBASIC24.31■■□□□ 1.48
CTDNEP1O95476 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CTDNEP1O95476 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CTDNEP1O95476 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
CTDNEP1O95476 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.3■■□□□ 1.48
CTDNEP1O95476 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CTDNEP1O95476 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CTDNEP1O95476 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.3■■□□□ 1.48
CTDNEP1O95476 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.3■■□□□ 1.48
CTDNEP1O95476 AC004854.2-201ENST00000608450 1441 ntBASIC24.3■■□□□ 1.48
CTDNEP1O95476 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CTDNEP1O95476 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.3■■□□□ 1.48
CTDNEP1O95476 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CTDNEP1O95476 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms