Protein–RNA interactions for Protein: O75525

KHDRBS3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, humanhuman

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3O75525 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDRBS3O75525 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDRBS3O75525 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.85■□□□□ 0.61
KHDRBS3O75525 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDRBS3O75525 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDRBS3O75525 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.84■□□□□ 0.61
KHDRBS3O75525 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.84■□□□□ 0.61
KHDRBS3O75525 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.84■□□□□ 0.61
KHDRBS3O75525 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.84■□□□□ 0.61
KHDRBS3O75525 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.84■□□□□ 0.61
KHDRBS3O75525 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.84■□□□□ 0.61
KHDRBS3O75525 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.84■□□□□ 0.61
KHDRBS3O75525 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KHDRBS3O75525 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KHDRBS3O75525 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.83■□□□□ 0.61
KHDRBS3O75525 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
KHDRBS3O75525 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KHDRBS3O75525 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.83■□□□□ 0.61
KHDRBS3O75525 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KHDRBS3O75525 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
KHDRBS3O75525 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.83■□□□□ 0.6
KHDRBS3O75525 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.83■□□□□ 0.6
KHDRBS3O75525 AC105233.4-201ENST00000642045 216 ntBASIC18.83■□□□□ 0.6
KHDRBS3O75525 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
KHDRBS3O75525 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KHDRBS3O75525 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.83■□□□□ 0.6
KHDRBS3O75525 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.83■□□□□ 0.6
KHDRBS3O75525 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KHDRBS3O75525 AC009237.3-201ENST00000393279 1427 ntBASIC18.83■□□□□ 0.6
KHDRBS3O75525 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.83■□□□□ 0.6
KHDRBS3O75525 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KHDRBS3O75525 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 RASA4CP-201ENST00000424092 1398 ntBASIC18.82■□□□□ 0.6
KHDRBS3O75525 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.82■□□□□ 0.6
KHDRBS3O75525 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KHDRBS3O75525 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.82■□□□□ 0.6
KHDRBS3O75525 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.82■□□□□ 0.6
KHDRBS3O75525 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.82■□□□□ 0.6
KHDRBS3O75525 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
KHDRBS3O75525 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KHDRBS3O75525 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDRBS3O75525 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KHDRBS3O75525 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDRBS3O75525 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDRBS3O75525 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDRBS3O75525 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDRBS3O75525 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 AF213884.3-201ENST00000563833 479 ntBASIC18.81■□□□□ 0.6
KHDRBS3O75525 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDRBS3O75525 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KHDRBS3O75525 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 FEM1AP4-201ENST00000443167 1987 ntBASIC18.81■□□□□ 0.6
KHDRBS3O75525 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.81■□□□□ 0.6
KHDRBS3O75525 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KHDRBS3O75525 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
KHDRBS3O75525 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 MIR939-201ENST00000401314 82 ntBASIC18.8■□□□□ 0.6
KHDRBS3O75525 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.8■□□□□ 0.6
KHDRBS3O75525 AC091305.1-201ENST00000479476 895 ntBASIC18.8■□□□□ 0.6
KHDRBS3O75525 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.8■□□□□ 0.6
KHDRBS3O75525 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KHDRBS3O75525 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KHDRBS3O75525 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.8■□□□□ 0.6
KHDRBS3O75525 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
KHDRBS3O75525 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KHDRBS3O75525 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
KHDRBS3O75525 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KHDRBS3O75525 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
KHDRBS3O75525 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms