Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS3O75489 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NDUFS3O75489 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.88■□□□□ 0.93
NDUFS3O75489 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS3O75489 YBX1P1-201ENST00000445822 960 ntBASIC20.88■□□□□ 0.93
NDUFS3O75489 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.88■□□□□ 0.93
NDUFS3O75489 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFS3O75489 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NDUFS3O75489 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.87■□□□□ 0.93
NDUFS3O75489 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NDUFS3O75489 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS3O75489 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NDUFS3O75489 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS3O75489 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS3O75489 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NDUFS3O75489 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NDUFS3O75489 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS3O75489 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.87■□□□□ 0.93
NDUFS3O75489 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NDUFS3O75489 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.87■□□□□ 0.93
NDUFS3O75489 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS3O75489 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFS3O75489 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS3O75489 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS3O75489 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS3O75489 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS3O75489 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS3O75489 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS3O75489 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NDUFS3O75489 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS3O75489 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
NDUFS3O75489 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS3O75489 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NDUFS3O75489 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFS3O75489 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NDUFS3O75489 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFS3O75489 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFS3O75489 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFS3O75489 AL049796.1-201ENST00000565336 1766 ntBASIC20.85■□□□□ 0.93
NDUFS3O75489 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.85■□□□□ 0.93
NDUFS3O75489 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.85■□□□□ 0.93
NDUFS3O75489 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFS3O75489 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.85■□□□□ 0.93
NDUFS3O75489 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.85■□□□□ 0.93
NDUFS3O75489 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFS3O75489 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFS3O75489 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFS3O75489 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NDUFS3O75489 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFS3O75489 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.85■□□□□ 0.93
NDUFS3O75489 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.84■□□□□ 0.93
NDUFS3O75489 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.84■□□□□ 0.93
NDUFS3O75489 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.84■□□□□ 0.93
NDUFS3O75489 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFS3O75489 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.84■□□□□ 0.93
NDUFS3O75489 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.84■□□□□ 0.93
NDUFS3O75489 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.83■□□□□ 0.93
NDUFS3O75489 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.83■□□□□ 0.93
NDUFS3O75489 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.83■□□□□ 0.93
NDUFS3O75489 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NDUFS3O75489 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NDUFS3O75489 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.83■□□□□ 0.93
NDUFS3O75489 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.83■□□□□ 0.93
NDUFS3O75489 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDUFS3O75489 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDUFS3O75489 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDUFS3O75489 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.83■□□□□ 0.92
NDUFS3O75489 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDUFS3O75489 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
NDUFS3O75489 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDUFS3O75489 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.82■□□□□ 0.92
NDUFS3O75489 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NDUFS3O75489 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NDUFS3O75489 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDUFS3O75489 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.82■□□□□ 0.92
NDUFS3O75489 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.82■□□□□ 0.92
NDUFS3O75489 TERF1P2-201ENST00000583350 1212 ntBASIC20.82■□□□□ 0.92
NDUFS3O75489 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.82■□□□□ 0.92
NDUFS3O75489 AC008175.2-201ENST00000612840 297 ntBASIC20.82■□□□□ 0.92
NDUFS3O75489 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.82■□□□□ 0.92
NDUFS3O75489 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDUFS3O75489 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NDUFS3O75489 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NDUFS3O75489 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDUFS3O75489 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NDUFS3O75489 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDUFS3O75489 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDUFS3O75489 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NDUFS3O75489 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NDUFS3O75489 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms