Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
PTCD1O75127 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC27.06■■□□□ 1.92
PTCD1O75127 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
PTCD1O75127 UNC93B5-201ENST00000530315 699 ntBASIC27.06■■□□□ 1.92
PTCD1O75127 AC142381.4-202ENST00000563973 229 ntBASIC27.06■■□□□ 1.92
PTCD1O75127 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PTCD1O75127 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.06■■□□□ 1.92
PTCD1O75127 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PTCD1O75127 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PTCD1O75127 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PTCD1O75127 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PTCD1O75127 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
PTCD1O75127 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC27.05■■□□□ 1.92
PTCD1O75127 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC27.05■■□□□ 1.92
PTCD1O75127 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC27.05■■□□□ 1.92
PTCD1O75127 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC27.05■■□□□ 1.92
PTCD1O75127 GATS-209ENST00000454084 1030 ntTSL 3 BASIC27.05■■□□□ 1.92
PTCD1O75127 AC080038.3-201ENST00000623346 1952 ntBASIC27.05■■□□□ 1.92
PTCD1O75127 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC27.05■■□□□ 1.92
PTCD1O75127 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
PTCD1O75127 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.04■■□□□ 1.92
PTCD1O75127 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.04■■□□□ 1.92
PTCD1O75127 AC026366.1-201ENST00000488803 879 ntBASIC27.04■■□□□ 1.92
PTCD1O75127 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC27.04■■□□□ 1.92
PTCD1O75127 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC27.04■■□□□ 1.92
PTCD1O75127 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC27.04■■□□□ 1.92
PTCD1O75127 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PTCD1O75127 MMD2-204ENST00000612910 778 ntTSL 5 BASIC27.04■■□□□ 1.92
PTCD1O75127 AP006294.2-201ENST00000641667 209 ntBASIC27.04■■□□□ 1.92
PTCD1O75127 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PTCD1O75127 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC27.04■■□□□ 1.92
PTCD1O75127 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.04■■□□□ 1.92
PTCD1O75127 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
PTCD1O75127 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
PTCD1O75127 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PTCD1O75127 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.03■■□□□ 1.92
PTCD1O75127 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.03■■□□□ 1.92
PTCD1O75127 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PTCD1O75127 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC27.03■■□□□ 1.92
PTCD1O75127 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PTCD1O75127 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
PTCD1O75127 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
PTCD1O75127 C11orf96-202ENST00000528572 1834 ntBASIC27.03■■□□□ 1.92
PTCD1O75127 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC27.03■■□□□ 1.92
PTCD1O75127 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PTCD1O75127 AC073648.6-201ENST00000641589 218 ntBASIC27.03■■□□□ 1.92
PTCD1O75127 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
PTCD1O75127 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PTCD1O75127 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PTCD1O75127 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
PTCD1O75127 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PTCD1O75127 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.02■■□□□ 1.92
PTCD1O75127 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC27.02■■□□□ 1.92
PTCD1O75127 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC27.02■■□□□ 1.92
PTCD1O75127 ARL16-209ENST00000573715 763 ntTSL 3 BASIC27.02■■□□□ 1.92
PTCD1O75127 ARL16-211ENST00000576135 694 ntTSL 3 BASIC27.02■■□□□ 1.92
PTCD1O75127 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PTCD1O75127 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.02■■□□□ 1.92
PTCD1O75127 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.92
PTCD1O75127 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC27.01■■□□□ 1.91
PTCD1O75127 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC27.01■■□□□ 1.91
PTCD1O75127 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCD1O75127 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCD1O75127 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PTCD1O75127 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PTCD1O75127 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC27.01■■□□□ 1.91
PTCD1O75127 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCD1O75127 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC27.01■■□□□ 1.91
PTCD1O75127 AP003097.1-201ENST00000530657 1135 ntBASIC27.01■■□□□ 1.91
PTCD1O75127 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC27.01■■□□□ 1.91
PTCD1O75127 C1orf229-201ENST00000623686 2258 ntBASIC27.01■■□□□ 1.91
PTCD1O75127 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.01■■□□□ 1.91
PTCD1O75127 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCD1O75127 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCD1O75127 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PTCD1O75127 ME2-208ENST00000638937 2471 ntTSL 5 BASIC27■■□□□ 1.91
PTCD1O75127 AC010542.4-201ENST00000563151 1910 ntBASIC27■■□□□ 1.91
PTCD1O75127 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
PTCD1O75127 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
PTCD1O75127 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC27■■□□□ 1.91
PTCD1O75127 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC27■■□□□ 1.91
PTCD1O75127 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
PTCD1O75127 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PTCD1O75127 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
PTCD1O75127 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27■■□□□ 1.91
PTCD1O75127 FAM21FP-204ENST00000608637 956 ntBASIC26.99■■□□□ 1.91
PTCD1O75127 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
PTCD1O75127 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PTCD1O75127 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PTCD1O75127 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PTCD1O75127 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCD1O75127 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCD1O75127 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PTCD1O75127 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCD1O75127 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCD1O75127 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
PTCD1O75127 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCD1O75127 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.98■■□□□ 1.91
PTCD1O75127 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCD1O75127 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms