Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HCN1O60741 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.53■□□□□ 0.72
HCN1O60741 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.53■□□□□ 0.72
HCN1O60741 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.53■□□□□ 0.72
HCN1O60741 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.53■□□□□ 0.72
HCN1O60741 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.53■□□□□ 0.72
HCN1O60741 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HCN1O60741 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HCN1O60741 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HCN1O60741 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCN1O60741 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.53■□□□□ 0.72
HCN1O60741 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCN1O60741 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HCN1O60741 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HCN1O60741 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.53■□□□□ 0.72
HCN1O60741 AC073130.3-201ENST00000624389 2278 ntBASIC19.53■□□□□ 0.72
HCN1O60741 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCN1O60741 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCN1O60741 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HCN1O60741 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.52■□□□□ 0.72
HCN1O60741 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCN1O60741 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HCN1O60741 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCN1O60741 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
HCN1O60741 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCN1O60741 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCN1O60741 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.52■□□□□ 0.72
HCN1O60741 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.52■□□□□ 0.72
HCN1O60741 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.52■□□□□ 0.72
HCN1O60741 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.52■□□□□ 0.72
HCN1O60741 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
HCN1O60741 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HCN1O60741 OR7E47P-201ENST00000546390 1422 ntBASIC19.51■□□□□ 0.71
HCN1O60741 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.51■□□□□ 0.71
HCN1O60741 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.51■□□□□ 0.71
HCN1O60741 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.51■□□□□ 0.71
HCN1O60741 RARRES2P11-201ENST00000635158 484 ntBASIC19.51■□□□□ 0.71
HCN1O60741 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 AP004607.4-201ENST00000530158 1459 ntBASIC19.51■□□□□ 0.71
HCN1O60741 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.51■□□□□ 0.71
HCN1O60741 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.51■□□□□ 0.71
HCN1O60741 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.51■□□□□ 0.71
HCN1O60741 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HCN1O60741 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HCN1O60741 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HCN1O60741 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HCN1O60741 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.5■□□□□ 0.71
HCN1O60741 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.5■□□□□ 0.71
HCN1O60741 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HCN1O60741 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HCN1O60741 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.5■□□□□ 0.71
HCN1O60741 AC079140.4-201ENST00000507448 529 ntBASIC19.5■□□□□ 0.71
HCN1O60741 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.5■□□□□ 0.71
HCN1O60741 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.5■□□□□ 0.71
HCN1O60741 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
HCN1O60741 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HCN1O60741 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HCN1O60741 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HCN1O60741 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HCN1O60741 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.5■□□□□ 0.71
HCN1O60741 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
HCN1O60741 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HCN1O60741 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HCN1O60741 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HCN1O60741 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HCN1O60741 AC005224.4-201ENST00000583262 1652 ntBASIC19.49■□□□□ 0.71
HCN1O60741 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.49■□□□□ 0.71
HCN1O60741 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HCN1O60741 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HCN1O60741 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HCN1O60741 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.49■□□□□ 0.71
HCN1O60741 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.49■□□□□ 0.71
HCN1O60741 KRT19P1-201ENST00000405746 1186 ntBASIC19.49■□□□□ 0.71
HCN1O60741 AC004911.1-201ENST00000416316 871 ntBASIC19.49■□□□□ 0.71
HCN1O60741 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.49■□□□□ 0.71
HCN1O60741 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
HCN1O60741 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HCN1O60741 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.49■□□□□ 0.71
HCN1O60741 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HCN1O60741 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.48■□□□□ 0.71
HCN1O60741 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HCN1O60741 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
HCN1O60741 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms