Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHL41O60662 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KLHL41O60662 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
KLHL41O60662 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.7■□□□□ 0.9
KLHL41O60662 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL41O60662 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL41O60662 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.7■□□□□ 0.9
KLHL41O60662 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL41O60662 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.7■□□□□ 0.9
KLHL41O60662 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.7■□□□□ 0.9
KLHL41O60662 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.7■□□□□ 0.9
KLHL41O60662 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.7■□□□□ 0.9
KLHL41O60662 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL41O60662 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL41O60662 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL41O60662 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
KLHL41O60662 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL41O60662 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL41O60662 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.7■□□□□ 0.9
KLHL41O60662 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL41O60662 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.7■□□□□ 0.9
KLHL41O60662 AL121603.2-201ENST00000557373 2117 ntBASIC20.69■□□□□ 0.9
KLHL41O60662 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.69■□□□□ 0.9
KLHL41O60662 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.69■□□□□ 0.9
KLHL41O60662 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL41O60662 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KLHL41O60662 IGHV3-19-201ENST00000521488 291 ntBASIC20.69■□□□□ 0.9
KLHL41O60662 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.69■□□□□ 0.9
KLHL41O60662 TSPY26P-201ENST00000476365 1326 ntBASIC20.69■□□□□ 0.9
KLHL41O60662 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL41O60662 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL41O60662 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL41O60662 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KLHL41O60662 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 AC123595.1-201ENST00000440769 1046 ntBASIC20.68■□□□□ 0.9
KLHL41O60662 AL354811.1-201ENST00000610286 706 ntBASIC20.68■□□□□ 0.9
KLHL41O60662 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.68■□□□□ 0.9
KLHL41O60662 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL41O60662 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.67■□□□□ 0.9
KLHL41O60662 FEM1AP1-201ENST00000431297 1995 ntBASIC20.67■□□□□ 0.9
KLHL41O60662 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
KLHL41O60662 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
KLHL41O60662 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL41O60662 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.67■□□□□ 0.9
KLHL41O60662 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.67■□□□□ 0.9
KLHL41O60662 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.67■□□□□ 0.9
KLHL41O60662 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.67■□□□□ 0.9
KLHL41O60662 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.67■□□□□ 0.9
KLHL41O60662 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.67■□□□□ 0.9
KLHL41O60662 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL41O60662 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL41O60662 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.67■□□□□ 0.9
KLHL41O60662 AC133637.1-201ENST00000624115 1537 ntBASIC20.67■□□□□ 0.9
KLHL41O60662 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
KLHL41O60662 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL41O60662 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL41O60662 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KLHL41O60662 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.66■□□□□ 0.9
KLHL41O60662 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 MIR572-201ENST00000384983 95 ntBASIC20.66■□□□□ 0.9
KLHL41O60662 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.66■□□□□ 0.9
KLHL41O60662 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.66■□□□□ 0.9
KLHL41O60662 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.66■□□□□ 0.9
KLHL41O60662 OXCT2P1-201ENST00000447263 1535 ntBASIC20.66■□□□□ 0.9
KLHL41O60662 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
KLHL41O60662 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.66■□□□□ 0.9
KLHL41O60662 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.66■□□□□ 0.9
KLHL41O60662 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL41O60662 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
KLHL41O60662 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.65■□□□□ 0.9
KLHL41O60662 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.65■□□□□ 0.9
KLHL41O60662 AC027612.3-201ENST00000413684 1047 ntBASIC20.65■□□□□ 0.9
KLHL41O60662 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 SLC47A1P1-202ENST00000449666 945 ntBASIC20.65■□□□□ 0.9
KLHL41O60662 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL41O60662 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.65■□□□□ 0.9
KLHL41O60662 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms