Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.66■□□□□ 0.9
GFRA3O60609 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.66■□□□□ 0.9
GFRA3O60609 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GFRA3O60609 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GFRA3O60609 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFRA3O60609 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFRA3O60609 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFRA3O60609 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFRA3O60609 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFRA3O60609 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
GFRA3O60609 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GFRA3O60609 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFRA3O60609 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GFRA3O60609 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFRA3O60609 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GFRA3O60609 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.65■□□□□ 0.9
GFRA3O60609 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
GFRA3O60609 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.65■□□□□ 0.9
GFRA3O60609 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GFRA3O60609 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GFRA3O60609 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.65■□□□□ 0.9
GFRA3O60609 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
GFRA3O60609 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
GFRA3O60609 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
GFRA3O60609 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GFRA3O60609 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.64■□□□□ 0.89
GFRA3O60609 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.64■□□□□ 0.89
GFRA3O60609 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GFRA3O60609 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.64■□□□□ 0.89
GFRA3O60609 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.64■□□□□ 0.89
GFRA3O60609 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
GFRA3O60609 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.64■□□□□ 0.89
GFRA3O60609 FAM21FP-204ENST00000608637 956 ntBASIC20.64■□□□□ 0.89
GFRA3O60609 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GFRA3O60609 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.64■□□□□ 0.89
GFRA3O60609 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
GFRA3O60609 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GFRA3O60609 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.64■□□□□ 0.89
GFRA3O60609 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFRA3O60609 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GFRA3O60609 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GFRA3O60609 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GFRA3O60609 AL353803.4-201ENST00000565882 1934 ntBASIC20.63■□□□□ 0.89
GFRA3O60609 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.63■□□□□ 0.89
GFRA3O60609 LINC01568-207ENST00000641790 1380 ntBASIC20.63■□□□□ 0.89
GFRA3O60609 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
GFRA3O60609 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFRA3O60609 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.63■□□□□ 0.89
GFRA3O60609 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.63■□□□□ 0.89
GFRA3O60609 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.63■□□□□ 0.89
GFRA3O60609 AC091076.1-201ENST00000610741 619 ntBASIC20.63■□□□□ 0.89
GFRA3O60609 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFRA3O60609 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
GFRA3O60609 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
GFRA3O60609 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFRA3O60609 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GFRA3O60609 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GFRA3O60609 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GFRA3O60609 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
GFRA3O60609 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
GFRA3O60609 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 AC104076.2-201ENST00000448912 469 ntBASIC20.62■□□□□ 0.89
GFRA3O60609 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.62■□□□□ 0.89
GFRA3O60609 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.62■□□□□ 0.89
GFRA3O60609 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
GFRA3O60609 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
GFRA3O60609 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFRA3O60609 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.62■□□□□ 0.89
GFRA3O60609 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFRA3O60609 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFRA3O60609 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFRA3O60609 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GFRA3O60609 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.61■□□□□ 0.89
GFRA3O60609 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFRA3O60609 MCRIP2P1-201ENST00000394346 511 ntBASIC20.61■□□□□ 0.89
GFRA3O60609 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.61■□□□□ 0.89
GFRA3O60609 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.61■□□□□ 0.89
GFRA3O60609 KRT18P48-201ENST00000434763 852 ntBASIC20.61■□□□□ 0.89
GFRA3O60609 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFRA3O60609 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.61■□□□□ 0.89
GFRA3O60609 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GFRA3O60609 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GFRA3O60609 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.61■□□□□ 0.89
GFRA3O60609 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.61■□□□□ 0.89
GFRA3O60609 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFRA3O60609 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
GFRA3O60609 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GFRA3O60609 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms