Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF13O43567 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF13O43567 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF13O43567 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF13O43567 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF13O43567 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF13O43567 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF13O43567 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF13O43567 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF13O43567 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 BX005040.4-201ENST00000637145 1518 ntBASIC19.04■□□□□ 0.64
RNF13O43567 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF13O43567 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF13O43567 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF13O43567 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF13O43567 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RNF13O43567 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF13O43567 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF13O43567 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF13O43567 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF13O43567 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF13O43567 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF13O43567 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF13O43567 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF13O43567 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RNF13O43567 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF13O43567 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RNF13O43567 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF13O43567 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RNF13O43567 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF13O43567 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF13O43567 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF13O43567 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
RNF13O43567 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.02■□□□□ 0.63
RNF13O43567 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF13O43567 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF13O43567 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF13O43567 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF13O43567 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF13O43567 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RNF13O43567 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF13O43567 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF13O43567 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF13O43567 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF13O43567 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF13O43567 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF13O43567 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF13O43567 AC005837.3-201ENST00000612163 286 ntBASIC19.01■□□□□ 0.63
RNF13O43567 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
RNF13O43567 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19■□□□□ 0.63
RNF13O43567 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19■□□□□ 0.63
RNF13O43567 AL121603.2-201ENST00000557373 2117 ntBASIC19■□□□□ 0.63
RNF13O43567 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19■□□□□ 0.63
RNF13O43567 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19■□□□□ 0.63
RNF13O43567 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
RNF13O43567 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19■□□□□ 0.63
RNF13O43567 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19■□□□□ 0.63
RNF13O43567 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 AC005224.4-201ENST00000583262 1652 ntBASIC19■□□□□ 0.63
RNF13O43567 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19■□□□□ 0.63
RNF13O43567 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19■□□□□ 0.63
RNF13O43567 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF13O43567 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF13O43567 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF13O43567 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF13O43567 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF13O43567 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF13O43567 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF13O43567 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF13O43567 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF13O43567 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF13O43567 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF13O43567 AC055733.4-201ENST00000638462 1354 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms