Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPB4C9JG80 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 DUX4L2-201ENST00000561772 1275 ntBASIC18.58■□□□□ 0.56
NPIPB4C9JG80 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 DUX4L6-201ENST00000626483 1275 ntBASIC18.58■□□□□ 0.56
NPIPB4C9JG80 DUX4L1-201ENST00000627662 1275 ntBASIC18.58■□□□□ 0.56
NPIPB4C9JG80 DUX4L8-201ENST00000629013 1275 ntBASIC18.58■□□□□ 0.56
NPIPB4C9JG80 DUX4L3-201ENST00000630187 1275 ntBASIC18.58■□□□□ 0.56
NPIPB4C9JG80 DUX4L7-201ENST00000630678 1275 ntBASIC18.58■□□□□ 0.56
NPIPB4C9JG80 DUX4L5-201ENST00000630834 1275 ntBASIC18.58■□□□□ 0.56
NPIPB4C9JG80 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.58■□□□□ 0.56
NPIPB4C9JG80 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 AC120498.10-201ENST00000621827 505 ntBASIC18.57■□□□□ 0.56
NPIPB4C9JG80 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPB4C9JG80 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 KRT18P20-201ENST00000548986 1279 ntBASIC18.56■□□□□ 0.56
NPIPB4C9JG80 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 CCDC92B-201ENST00000575506 885 ntBASIC18.56■□□□□ 0.56
NPIPB4C9JG80 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.56■□□□□ 0.56
NPIPB4C9JG80 AC006128.1-201ENST00000624704 1661 ntBASIC18.56■□□□□ 0.56
NPIPB4C9JG80 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPB4C9JG80 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 ZNRF2P3-201ENST00000424200 374 ntBASIC18.55■□□□□ 0.56
NPIPB4C9JG80 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB4C9JG80 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.54■□□□□ 0.56
NPIPB4C9JG80 AC121338.2-201ENST00000622535 1744 ntBASIC18.54■□□□□ 0.56
NPIPB4C9JG80 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 KRT18P14-201ENST00000534205 1250 ntBASIC18.54■□□□□ 0.56
NPIPB4C9JG80 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPB4C9JG80 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms