Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC162PA2VCL2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC162PA2VCL2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 AL049796.1-201ENST00000565336 1766 ntBASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC162PA2VCL2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 AC061975.6-201ENST00000579045 1553 ntBASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 PKD1P6-201ENST00000343738 4769 ntBASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC162PA2VCL2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC162PA2VCL2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC162PA2VCL2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 AC138907.5-202ENST00000569484 235 ntBASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 AC104187.1-201ENST00000607510 612 ntBASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC162PA2VCL2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC162PA2VCL2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC162PA2VCL2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC162PA2VCL2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC162PA2VCL2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CCDC162PA2VCL2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC162PA2VCL2 AC004854.2-201ENST00000608450 1441 ntBASIC20.89■□□□□ 0.94
CCDC162PA2VCL2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC162PA2VCL2 DUX4L2-201ENST00000561772 1275 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms