Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRDV1A0A1B0GX56 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 AL162377.1-201ENST00000618844 1793 ntBASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 AC010141.3-201ENST00000456659 717 ntBASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRDV1A0A1B0GX56 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.44■□□□□ 0.54
TRDV1A0A1B0GX56 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 KRT8P33-201ENST00000508125 1423 ntBASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 AP004607.7-201ENST00000527152 1677 ntBASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.43■□□□□ 0.54
TRDV1A0A1B0GX56 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 MTDHP2-201ENST00000601468 714 ntBASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 pRNA.6-201ENST00000610482 90 ntBASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 pRNA.5-201ENST00000612139 90 ntBASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 pRNA.11-201ENST00000618423 90 ntBASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 pRNA.13-201ENST00000619112 90 ntBASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.42■□□□□ 0.54
TRDV1A0A1B0GX56 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRDV1A0A1B0GX56 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms