Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 AF106564.1-201ENST00000607058 2553 ntBASIC20.73■□□□□ 0.91
TRBV5-4A0A0C4DH59 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 AC120498.10-201ENST00000621827 505 ntBASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV5-4A0A0C4DH59 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV5-4A0A0C4DH59 AC005229.4-201ENST00000610085 2198 ntBASIC20.7■□□□□ 0.91
TRBV5-4A0A0C4DH59 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.7■□□□□ 0.91
TRBV5-4A0A0C4DH59 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 UBE2DNL-204ENST00000602536 740 ntBASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 RARRES2P11-201ENST00000635158 484 ntBASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRBV5-4A0A0C4DH59 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRBV5-4A0A0C4DH59 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 AL137060.1-201ENST00000618151 2648 ntBASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRBV5-4A0A0C4DH59 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 AC006015.1-201ENST00000429970 570 ntBASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms